>gnl|CDD|72981 cd03222, ABC_RNaseL_inhibitor, The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 177

Score = 58.5 bits (141), Expect = 4e-09 Identities = 49/193 (25%), Positives = 70/193 (36%), Gaps = 56/193 (29%) Query: 323 ISKSYND-RLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIHVGETVC 381 K Y LL++ K G ++G++GPNG GKTT ++L G P Sbjct: 6 CVKRYGVFFLLVELGVVK--EGEVIGIVGPNGTGKTTAVKILAGQLIP------------ 51 Query: 382 LSYVDQSRDSLEAEKTVWEDISGGDDIVKLNGHEINSRAYCSAFNFKGGDQQQRIGSLSG 441 + W+ I+ Y + Q I LSG Sbjct: 52 -----------NGDNDEWDGIT---------------PVY----------KPQYI-DLSG 74 Query: 442 GQRGRVHLAKILKSGGNVILLDEPTNDLDTETLSALEDALENFA----GCAVIISHDRMF 497 G+ RV +A L L DEP+ LD E A+ + A+++ HD Sbjct: 75 GELQRVAIAAALLRNATFYLFDEPSAYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAV 134 Query: 498 LDRLATHILAFEG 510 LD L+ I FEG Sbjct: 135 LDYLSDRIHVFEG 147

RPSBLAST alignment for GI: 254780273 and conserved domain: cd03222