RPSBLAST alignment for GI: 254780273 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 47.5 bits (113), Expect = 9e-06
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 43/200 (21%)
Query: 13 SKVFGSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGFTVG 72
K +L D + P + +LG G+G ST+L+ +A +
Sbjct: 14 GKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVS----------- 62
Query: 73 YLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIAKLQDIIDSKGLW 132
+EG H YN K E + I S+
Sbjct: 63 ------------------VEGDIH-------YN----GIPYKEFAEKYPGEIIYVSEEDV 93
Query: 133 DLET-EVQVAIE-SLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLLDEPTNHLDAE 190
T V+ ++ +L C + + +SGGE++RV++ + L+S +L D T LD+
Sbjct: 94 HFPTLTVRETLDFALRCKGNE-FVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSS 152
Query: 191 TIAWMEKYLREYSGAVLMVT 210
T + K +R + + T
Sbjct: 153 TALEILKCIRTMADVLKTTT 172