RPSBLAST alignment for GI: 254780273 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 93.7 bits (233), Expect = 1e-19
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 45/228 (19%)
Query: 19 KKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGF--------- 69
LD+++L+ K+ I+G G+GKST+L+++AG+ K +G + L G
Sbjct: 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSG-SVLLDGTDIRQLDPAD 75
Query: 70 ---TVGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIAKLQDII 126
+GY+PQ+ L T+++NI G +E ++ +E +A + D +
Sbjct: 76 LRRNIGYVPQDVTL-FYGTLRDNITLGAPLAD------DERILRAAE-----LAGVTDFV 123
Query: 127 DS--KGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLLDEPT 184
+ GL ++Q+ G LSGG+++ VAL + LL+ P +LLLDEPT
Sbjct: 124 NKHPNGL-----DLQI----------GERGRGLSGGQRQAVALARALLNDPPILLLDEPT 168
Query: 185 NHLDAETIAWMEKYLREYSG--AVLMVTHDRYFLDNVTNWILEVDRGK 230
+ +D + +++ LR+ G ++++TH R L ++ + I+ +D G+
Sbjct: 169 SAMDMNSEERLKERLRQLLGDKTLIIITH-RPSLLDLVDRIIVMDSGR 215