RPSBLAST alignment for GI: 254780273 and conserved domain: cd03279

>gnl|CDD|73038 cd03279, ABC_sbcCD, SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends. They cleave ends sealed by hairpin structures and are thought to play a role in removing protein bound to DNA termini.. Length = 213

 Score = 44.1 bits (104), Expect = 9e-05
 Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 41/194 (21%)

Query: 339 KLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIHV-GETVCLSYVDQSRDSLE-AEK 396
            L   G+  + GP GAGK+T+          D+ T  + G+T      +  R      E 
Sbjct: 24  GLDNNGLFLICGPTGAGKSTIL---------DAITYALYGKTPRYGRQENLRSVFAPGED 74

Query: 397 TVWEDISGGDDIVKLNGHE--------INSRAYCSAFNFKGGDQQQ----RIGSLSGGQR 444
           T     +      +L G +        ++   +        G+  +     + +LSGG+ 
Sbjct: 75  TAEVSFT-----FQLGGKKYRVERSRGLDYDQFTRIVLLPQGEFDRFLARPVSTLSGGET 129

Query: 445 GRVHLA------KILKSGGNVIL----LDEPTNDLDTETLSALEDALENFAG---CAVII 491
               L+      ++L++ G   L    +DE    LD E L A+  ALE          +I
Sbjct: 130 FLASLSLALALSEVLQNRGGARLEALFIDEGFGTLDPEALEAVATALELIRTENRMVGVI 189

Query: 492 SHDRMFLDRLATHI 505
           SH     +R+   +
Sbjct: 190 SHVEELKERIPQRL 203