HHsearch alignment for GI: 254780274 and conserved domain: COG2939
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].
Probab=96.08 E-value=0.12 Score=29.97 Aligned_cols=116 Identities=14% Similarity=-0.011 Sum_probs=74.3
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHH-------------------HHHCCCEEEEECCH-HHCCCCCCCCCCCCCCCHH
Q ss_conf 899967999988687898889999999-------------------99869899995860-2088553678766655639
Q gi|254780274|r 24 HKTPRAIILACQSIEENIEDYNDFREY-------------------FAEENVAVYIYSYR-NTIKTTSDYLRDYPKNTSD 83 (317)
Q Consensus 24 ~~~p~~~vl~~HG~~~~~~~~~~~~~~-------------------l~~~G~~V~a~D~r-G~G~s~~~~~~~~~~~~~~ 83 (317)
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~--~-e~~~d~ 172 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALG--D-EKKKDF 172 (498)
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC-CCEEEEECCCCCCCCCCCC--C-CCCCCH
T ss_conf 87778669996688971765535663398363079999999994220147-7569971676667454554--2-112231
Q ss_pred HHHHHHHHHHHHHHHHHC---C--CCEEEEEECCCCHHHHHHHHHHCCH---HHHEHEECCCCCCCCC
Q ss_conf 999999999999999855---9--9559999338722899999996832---3213202277777544
Q gi|254780274|r 84 TTIVCDVMKLRTLISEKH---G--NTSVLLFGYSLGTIIALSTLLKYPQ---KFSGIALWNLDLCFEK 143 (317)
Q Consensus 84 ~~~~~d~~~~~~~~~~~~---~--~~~v~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~~~~~ 143 (317)
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
T ss_conf 00211299999999999898765047606730452102568999999872205577267452353377