HHsearch alignment for GI: 254780274 and conserved domain: KOG4372
>KOG4372 consensus.
Probab=95.92 E-value=0.017 Score=35.59 Aligned_cols=92 Identities=11% Similarity=0.183 Sum_probs=50.0
Q ss_pred CCCCCCCEEEEEECCCCC-CHHHHHHHHHHHHHCCCEEEEECCHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 488999679999886878-98889999999998698999958602088-5536787666556399999999999999998
Q gi|254780274|r 22 QTHKTPRAIILACQSIEE-NIEDYNDFREYFAEENVAVYIYSYRNTIK-TTSDYLRDYPKNTSDTTIVCDVMKLRTLISE 99 (317)
Q Consensus 22 ~~~~~p~~~vl~~HG~~~-~~~~~~~~~~~l~~~G~~V~a~D~rG~G~-s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (317)
T Consensus 74 ~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~---Gv~~lG~Rla~~~~e~~~~~-- 147 (405)
T KOG4372 74 SFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFD---GVDVLGERLAEEVKETLYDY-- 147 (405)
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCCHHHCCC---CCEEEECCCHHHHHHHHHCC--
T ss_conf 6556796379961555543589999877765217-97516865033442122145---63442102078876543015--
Q ss_pred HCCCCEEEEEECCCCHHHHHHH
Q ss_conf 5599559999338722899999
Q gi|254780274|r 100 KHGNTSVLLFGYSLGTIIALST 121 (317)
Q Consensus 100 ~~~~~~v~lvGhS~GG~ia~~~ 121 (317)
T Consensus 148 --si~kISfvghSLGGLvar~A 167 (405)
T KOG4372 148 --SIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred --CCCEEEEEEEECCCEEEEEE
T ss_conf --54300045541577224678