HHsearch alignment for GI: 254780274 and conserved domain: PRK10115

>PRK10115 protease 2; Provisional.
Probab=98.45  E-value=8.3e-06  Score=57.55  Aligned_cols=252  Identities=11%  Similarity=0.031  Sum_probs=132.0

Q ss_pred             CEEEEEECCCEEEEEE-EEECCC--CCCCEEEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCC
Q ss_conf             2499950893789999-973488--99967999988687898--889999999998698999958602088553678766
Q gi|254780274|r    3 QKTFLTEDETIHKSVH-SYNQTH--KTPRAIILACQSIEENI--EDYNDFREYFAEENVAVYIYSYRNTIKTTSDYLRDY   77 (317)
Q Consensus         3 ~~~~~~~~~~~~~~~~-~~~~~~--~~p~~~vl~~HG~~~~~--~~~~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~   77 (317)
T Consensus       417 ~rv~~~SkDGt~VP~siv~rk~~~~dg~~P~lLyGYG~ygis~~p~Fs~~~l~ll~rG~v~AiahvRGGgE~G-~~Wh~~  495 (686)
T PRK10115        417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG-QQWYED  495 (686)
T ss_pred             EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCC-CHHHHH
T ss_conf             9999988999783179998068876789877999976466632786266575686589789999615788774-478986


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCHHHHHHHHHHCCHHHHEHEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf             655639999999999999999855--995599993387228999999968323213202277777544101566888777
Q gi|254780274|r   78 PKNTSDTTIVCDVMKLRTLISEKH--GNTSVLLFGYSLGTIIALSTLLKYPQKFSGIALWNLDLCFEKYSCMLMTLLLKI  155 (317)
Q Consensus        78 ~~~~~~~~~~~d~~~~~~~~~~~~--~~~~v~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~  155 (317)
T Consensus       496 G~~~~K~n~f~Dfia~ae~Li~~g~t~~~~l~~~G~SaGGLLvga~~n~~Pelf~a~v~~Vp~vD~l~~-----------  564 (686)
T PRK10115        496 GKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVVTT-----------  564 (686)
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHHCEEEECCCCCCCEEC-----------
T ss_conf             656459647799999999999839998302899972758888999885195763557866772232121-----------


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             75305632102343331111100111001233445744688887642115789789999999998500023331035688
Q gi|254780274|r  156 EKFFKGSDTPSRLMRHLTTDLWNRNNQNWKNFLKDHSVKKNSQNYILDSNHIPISVWLEFMSMATDISSRGSFNPLSRFI  235 (317)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (317)
T Consensus       565 ---~~d~~~plt~---~e------------~~E~G~p~~~~~~~~i~------------------~YsPy~nv~~~-~YP  607 (686)
T PRK10115        565 ---MLDESIPLTT---GE------------FEEWGNPQDPQYYEYMK------------------SYSPYDNVTAQ-AYP  607 (686)
T ss_pred             ---CCCCCCCCCC---CH------------HHHCCCCCCHHHHHHHH------------------HCCCHHCCCCC-CCC
T ss_conf             ---3347878886---41------------20137968999999998------------------65924258978-898


Q ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC--CCEEEEECCCCCCCCCCCCCHHHHHH---H---HHHHHHHCCCCC
Q ss_conf             479997268887467579999999999857899--82899825983165656989899999---9---999998323731
Q gi|254780274|r  236 PFCLIGGGNVSSKIEDLTQTYKLTTRLQNEEFY--DISLMSLPPTMHSNDPHNVFPPPAIK---K---LRNWIVNSYLPK  307 (317)
Q Consensus       236 Pvlli~G~~D~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~pg~~H~~~l~e~~~~~~~~---~---i~~Wl~~~~~~~  307 (317)
T Consensus       608 ~~l~tt~~~D~RV~~~--~~~K~~A~L~~~~~~~~p~ll~~~~~aGHg~---~~~~~~~~~e~A~~~aFll~~~~~~~~~  682 (686)
T PRK10115        608 HLLVTTGLHDSQVQYW--EPAKWVAKLRELKTDDHLLLLCTDMDSGHGG---KSGRFKSYEGVAMEYAFLIALAQGTLPA  682 (686)
T ss_pred             HHHEEECCCCCCCCCC--HHHHHHHHHHHHCCCCCEEEEEECCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             6878842688887977--7799999998636599708999647686778---8888999999999999999973066998


Q ss_pred             C
Q ss_conf             1
Q gi|254780274|r  308 V  308 (317)
Q Consensus       308 ~  308 (317)
T Consensus       683 ~  683 (686)
T PRK10115        683 T  683 (686)
T ss_pred             C
T ss_conf             8