HHsearch alignment for GI: 254780274 and conserved domain: TIGR01838

>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I; InterPro: IPR010963 This entry represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerises hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of the cell.; GO: 0008415 acyltransferase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=98.18  E-value=5e-05  Score=52.40  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=77.9

Q ss_pred             CCCCCEEEEEECCCCCCHHHH-------HHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             899967999988687898889-------9999999986989999586020885536787666556399999999999999
Q gi|254780274|r   24 HKTPRAIILACQSIEENIEDY-------NDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKLRTL   96 (317)
Q Consensus        24 ~~~p~~~vl~~HG~~~~~~~~-------~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~~~~   96 (317)
T Consensus       184 e~V~~tPlLiVPP--~INKyYILDLrP~NSlvrWlv~QG~TVF~~SWrNPd~~-------~A~~tfdDY~~~G~~~Al~~  254 (541)
T TIGR01838       184 ETVHKTPLLIVPP--FINKYYILDLRPENSLVRWLVEQGHTVFLISWRNPDAE-------QADLTFDDYVRDGVIAALEV  254 (541)
T ss_pred             CCCCCCEEEEECC--CCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHH-------HHHCCHHHHHHHHHHHHHHH
T ss_conf             2404302587378--73311201678653589999954993899860062756-------45367478999999999999


Q ss_pred             HHHHCCCCEEEEEECCCCHHH---HHH-HHHHC-CHHHHEHEECCCCCC
Q ss_conf             998559955999933872289---999-99968-323213202277777
Q gi|254780274|r   97 ISEKHGNTSVLLFGYSLGTII---ALS-TLLKY-PQKFSGIALWNLDLC  140 (317)
Q Consensus        97 ~~~~~~~~~v~lvGhS~GG~i---a~~-~a~~~-p~~v~~lvl~~~~~~  140 (317)
T Consensus       255 v~~itGe~~~N~~GYCIGGT~Ls~alA~lAArg~~~ri~SaTffTTllD  303 (541)
T TIGR01838       255 VEEITGEKQVNAVGYCIGGTLLSTALAYLAARGEKKRIKSATFFTTLLD  303 (541)
T ss_pred             HHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf             9861554065045410447899999999996178961245889999843