HHsearch alignment for GI: 254780274 and conserved domain: TIGR01849
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular; InterPro: IPR010915 This entry represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting..
Probab=97.18 E-value=0.016 Score=35.71 Aligned_cols=259 Identities=10% Similarity=0.038 Sum_probs=143.7
Q ss_pred CEEEEEECCCCCC-HHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 6799998868789-888999999999869899995860208855367876665563999999999999999985599559
Q gi|254780274|r 28 RAIILACQSIEEN-IEDYNDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKLRTLISEKHGNTSV 106 (317)
Q Consensus 28 ~~~vl~~HG~~~~-~~~~~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v 106 (317)
T Consensus 109 dp~vLiVAPmSGHyATLLR~TV~aLLP~-~dVYiTDW~~AR~VPl~----aG~FD-~~DYIdY~ief~~~l----Gp~r~ 178 (414)
T TIGR01849 109 DPKVLIVAPMSGHYATLLRSTVEALLPD-HDVYITDWVDARMVPLE----AGKFD-LEDYIDYLIEFLRFL----GPDRI 178 (414)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHCCC-CCEEEECCCCCCCCCHH----HCCCC-HHHHHHHHHHHHHHH----CCCCC
T ss_conf 8712785674125666556789985789-96788631401603050----08643-356899999999971----88976
Q ss_pred EEEECCCCHHHHHHHH-----HHCCHHHHEHEECCCCCCCCCCCHHHHHHHH-----HHHH----------HHCCCCCHH
Q ss_conf 9993387228999999-----9683232132022777775441015668887-----7775----------305632102
Q gi|254780274|r 107 LLFGYSLGTIIALSTL-----LKYPQKFSGIALWNLDLCFEKYSCMLMTLLL-----KIEK----------FFKGSDTPS 166 (317)
Q Consensus 107 ~lvGhS~GG~ia~~~a-----~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~ 166 (317)
T Consensus 179 hV~aVCQP~vPvLAA~aLmae~~~P~~P~sm~lmGGPIDaR~~PT~VN~lA~~~~~eWF~~n~i~~VP~~YpG~GR~VYP 258 (414)
T TIGR01849 179 HVVAVCQPAVPVLAAVALMAENEEPAQPRSMTLMGGPIDARASPTVVNELAKEKPIEWFQENLIMRVPFPYPGAGRKVYP 258 (414)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEECCCCCCCCCCCCCC
T ss_conf 37887468457999999987457888884057627776645552134430012672788538764084267778854371
Q ss_pred HHHHHHHHHHHCCCCCCCC---CCCCC-CCCHHH-------HHHHHHCCCCCCHHHHHHHHHHHHHHHHHH---------
Q ss_conf 3433311111001110012---33445-744688-------887642115789789999999998500023---------
Q gi|254780274|r 167 RLMRHLTTDLWNRNNQNWK---NFLKD-HSVKKN-------SQNYILDSNHIPISVWLEFMSMATDISSRG--------- 226 (317)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 226 (317)
T Consensus 259 GFlQLagF~SmN~dRH~~aH~~~~~~LvkgDg~~Ad~H~~FYDE-YLaVmDmtAEFYLqTi~~VF~q~~Lp~G~~~~~G~ 337 (414)
T TIGR01849 259 GFLQLAGFISMNLDRHVKAHKDFFAHLVKGDGDEADKHRKFYDE-YLAVMDMTAEFYLQTIDVVFQQFLLPKGKFIVEGK 337 (414)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCE
T ss_conf 38888868840656679999999998623752577888763124-53205450344554899998653144771678874
Q ss_pred --HHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC--CCEEEEECCCCCCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf --331035688479997268887467579999999999857899--82899825983165656-9898999999999998
Q gi|254780274|r 227 --SFNPLSRFIPFCLIGGGNVSSKIEDLTQTYKLTTRLQNEEFY--DISLMSLPPTMHSNDPH-NVFPPPAIKKLRNWIV 301 (317)
Q Consensus 227 --~~~~~~~~~Pvlli~G~~D~~~~~~~~~~~~~~~~l~~~~~~--~~~l~~~pg~~H~~~l~-e~~~~~~~~~i~~Wl~ 301 (317)
T Consensus 338 rVd~~~I-t~~ALltvEGEnDDIsg~G-Q-T-~AA~~LCt-gIpe~~k~~~~~pgvGHYGvF~GsrfR~~I~P~v~~FI~ 412 (414)
T TIGR01849 338 RVDPKAI-TKVALLTVEGENDDISGLG-Q-T-KAALKLCT-GIPEDMKRHYLQPGVGHYGVFSGSRFREEIYPRVREFIR 412 (414)
T ss_pred EECHHHC-CEEEEEEECCCCCCCCCCH-H-H-HHHHHHCC-CCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 3164341-3454344326522337403-7-8-99998437-987688775156887313543684001136606899874
Q ss_pred H
Q ss_conf 3
Q gi|254780274|r 302 N 302 (317)
Q Consensus 302 ~ 302 (317)
T Consensus 413 ~ 413 (414)
T TIGR01849 413 R 413 (414)
T ss_pred C
T ss_conf 1