HHsearch alignment for GI: 254780274 and conserved domain: TIGR02427

>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase; InterPro: IPR012790 These proteins are 3-oxoadipate enol-lactonases (also called beta-ketoadipate enol-lactone hydrolase), which catalyse the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate can all be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this entry were chosen from within protocatechuate degradation operons of at least three genes of the pathway, and from genomes with the complete pathway through beta-ketoadipate.; GO: 0047570 3-oxoadipate enol-lactonase activity, 0019614 catechol catabolic process.
Probab=99.95  E-value=5.4e-26  Score=191.76  Aligned_cols=249  Identities=13%  Similarity=0.116  Sum_probs=184.1

Q ss_pred             EECC-CCC-CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             7348-899-9679999886878988899999999986989999586020885--53678766655639999999999999
Q gi|254780274|r   20 YNQT-HKT-PRAIILACQSIEENIEDYNDFREYFAEENVAVYIYSYRNTIKT--TSDYLRDYPKNTSDTTIVCDVMKLRT   95 (317)
Q Consensus        20 ~~~~-~~~-p~~~vl~~HG~~~~~~~~~~~~~~l~~~G~~V~a~D~rG~G~s--~~~~~~~~~~~~~~~~~~~d~~~~~~   95 (317)
T Consensus         4 y~~~~G~~~~~P~Lvf~NSLGTDl~~Wd~v~~~L~~~-f~~lryD~RGHG~Srad~~~~p-----Ysi~dLa~Dv~aLlD   77 (256)
T TIGR02427         4 YRLDDGAAAGAPVLVFINSLGTDLRMWDPVLPALTAD-FRVLRYDKRGHGLSRADVPEGP-----YSIEDLADDVLALLD   77 (256)
T ss_pred             EEEECCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCCCCCCC-----CCHHHHHHHHHHHHH
T ss_conf             3320477888867887174104465568998620279-1799885088987557788888-----678778999999987


Q ss_pred             HHHHHCCCCEEEEEECCCCHHHHHHHHHHCCHHHHEHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99985599559999338722899999996832321320227777754410156688877775305632102343331111
Q gi|254780274|r   96 LISEKHGNTSVLLFGYSLGTIIALSTLLKYPQKFSGIALWNLDLCFEKYSCMLMTLLLKIEKFFKGSDTPSRLMRHLTTD  175 (317)
Q Consensus        96 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (317)
T Consensus        78 ~l----~i~~a~~cGLS~GGliaq~La~~~pdrV~~lvl~nTAakIG~~~~W~~Ri~~v~~~G---qa-l~al~Dav~~R  149 (256)
T TIGR02427        78 HL----GIEKAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEG---QA-LAALADAVLER  149 (256)
T ss_pred             HH----HHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC---CH-HHHHHHHHCCC
T ss_conf             87----252411244337889999986200677779887622431579750489999999717---23-46777421112


Q ss_pred             HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHH
Q ss_conf             10011100123344574468888764211578978999999999850002333103568847999726888746757999
Q gi|254780274|r  176 LWNRNNQNWKNFLKDHSVKKNSQNYILDSNHIPISVWLEFMSMATDISSRGSFNPLSRFIPFCLIGGGNVSSKIEDLTQT  255 (317)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlli~G~~D~~~~~~~~~~  255 (317)
T Consensus       150 WFt~~F--------~~~~~~~~~~~~~Ml~~q~~~GYag~CaAirdaDf~~~~~~I--~VPtL~iaG~~D~sTPP--~~~  217 (256)
T TIGR02427       150 WFTPGF--------REAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAI--AVPTLVIAGDEDGSTPP--ELV  217 (256)
T ss_pred             CCCHHH--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCH--HHH
T ss_conf             368555--------321089999999998608986878999999606888776214--44414763677888986--789


Q ss_pred             HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9999999857899828998259831656569898999999999998
Q gi|254780274|r  256 YKLTTRLQNEEFYDISLMSLPPTMHSNDPHNVFPPPAIKKLRNWIV  301 (317)
Q Consensus       256 ~~~~~~l~~~~~~~~~l~~~pg~~H~~~l~e~~~~~~~~~i~~Wl~  301 (317)
T Consensus       218 r~iA~-----~vpGa~~~~i~~agH--lp~~E~P~A~~~~l~~FL~  256 (256)
T TIGR02427       218 REIAD-----LVPGARFAEIRGAGH--LPCVEQPEAFNAALRDFLR  256 (256)
T ss_pred             HHHHH-----HCCCCEEEEECCCCC--CCCCCCHHHHHHHHHHHHC
T ss_conf             99997-----369971687778888--8850465899999999709