HHsearch alignment for GI: 254780274 and conserved domain: TIGR02427
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase; InterPro: IPR012790 These proteins are 3-oxoadipate enol-lactonases (also called beta-ketoadipate enol-lactone hydrolase), which catalyse the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate can all be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this entry were chosen from within protocatechuate degradation operons of at least three genes of the pathway, and from genomes with the complete pathway through beta-ketoadipate.; GO: 0047570 3-oxoadipate enol-lactonase activity, 0019614 catechol catabolic process.
Probab=99.95 E-value=5.4e-26 Score=191.76 Aligned_cols=249 Identities=13% Similarity=0.116 Sum_probs=184.1
Q ss_pred EECC-CCC-CCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 7348-899-9679999886878988899999999986989999586020885--53678766655639999999999999
Q gi|254780274|r 20 YNQT-HKT-PRAIILACQSIEENIEDYNDFREYFAEENVAVYIYSYRNTIKT--TSDYLRDYPKNTSDTTIVCDVMKLRT 95 (317)
Q Consensus 20 ~~~~-~~~-p~~~vl~~HG~~~~~~~~~~~~~~l~~~G~~V~a~D~rG~G~s--~~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (317)
T Consensus 4 y~~~~G~~~~~P~Lvf~NSLGTDl~~Wd~v~~~L~~~-f~~lryD~RGHG~Srad~~~~p-----Ysi~dLa~Dv~aLlD 77 (256)
T TIGR02427 4 YRLDDGAAAGAPVLVFINSLGTDLRMWDPVLPALTAD-FRVLRYDKRGHGLSRADVPEGP-----YSIEDLADDVLALLD 77 (256)
T ss_pred EEEECCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCCCCCCC-----CCHHHHHHHHHHHHH
T ss_conf 3320477888867887174104465568998620279-1799885088987557788888-----678778999999987
Q ss_pred HHHHHCCCCEEEEEECCCCHHHHHHHHHHCCHHHHEHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99985599559999338722899999996832321320227777754410156688877775305632102343331111
Q gi|254780274|r 96 LISEKHGNTSVLLFGYSLGTIIALSTLLKYPQKFSGIALWNLDLCFEKYSCMLMTLLLKIEKFFKGSDTPSRLMRHLTTD 175 (317)
Q Consensus 96 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (317)
T Consensus 78 ~l----~i~~a~~cGLS~GGliaq~La~~~pdrV~~lvl~nTAakIG~~~~W~~Ri~~v~~~G---qa-l~al~Dav~~R 149 (256)
T TIGR02427 78 HL----GIEKAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEG---QA-LAALADAVLER 149 (256)
T ss_pred HH----HHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC---CH-HHHHHHHHCCC
T ss_conf 87----252411244337889999986200677779887622431579750489999999717---23-46777421112
Q ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHH
Q ss_conf 10011100123344574468888764211578978999999999850002333103568847999726888746757999
Q gi|254780274|r 176 LWNRNNQNWKNFLKDHSVKKNSQNYILDSNHIPISVWLEFMSMATDISSRGSFNPLSRFIPFCLIGGGNVSSKIEDLTQT 255 (317)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlli~G~~D~~~~~~~~~~ 255 (317)
T Consensus 150 WFt~~F--------~~~~~~~~~~~~~Ml~~q~~~GYag~CaAirdaDf~~~~~~I--~VPtL~iaG~~D~sTPP--~~~ 217 (256)
T TIGR02427 150 WFTPGF--------REAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAI--AVPTLVIAGDEDGSTPP--ELV 217 (256)
T ss_pred CCCHHH--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCH--HHH
T ss_conf 368555--------321089999999998608986878999999606888776214--44414763677888986--789
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999857899828998259831656569898999999999998
Q gi|254780274|r 256 YKLTTRLQNEEFYDISLMSLPPTMHSNDPHNVFPPPAIKKLRNWIV 301 (317)
Q Consensus 256 ~~~~~~l~~~~~~~~~l~~~pg~~H~~~l~e~~~~~~~~~i~~Wl~ 301 (317)
T Consensus 218 r~iA~-----~vpGa~~~~i~~agH--lp~~E~P~A~~~~l~~FL~ 256 (256)
T TIGR02427 218 REIAD-----LVPGARFAEIRGAGH--LPCVEQPEAFNAALRDFLR 256 (256)
T ss_pred HHHHH-----HCCCCEEEEECCCCC--CCCCCCHHHHHHHHHHHHC
T ss_conf 99997-----369971687778888--8850465899999999709