HHsearch alignment for GI: 254780274 and conserved domain: pfam03403

>pfam03403 PAF-AH_p_II isoform II. Platelet-activating factor acetylhydrolase (PAF-AH) is a subfamily of phospholipases A2, responsible for inactivation of platelet-activating factor through cleavage of an acetyl group. Three known PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose catalytic beta and gamma subunits are aligned in pfam02266, the extracellular, plasma PAF-AH (pPAF-AH), and the intracellular PAF-AH isoform II (PAF-AH II). This family aligns pPAF-AH and PAF-AH II, whose similarity was previously noted.
Probab=99.22  E-value=1.1e-10  Score=90.01  Aligned_cols=114  Identities=11%  Similarity=0.097  Sum_probs=76.2

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCC--------CCCCC--------CCCCCC-------H
Q ss_conf             996799998868789888999999999869899995860208855--------36787--------666556-------3
Q gi|254780274|r   26 TPRAIILACQSIEENIEDYNDFREYFAEENVAVYIYSYRNTIKTT--------SDYLR--------DYPKNT-------S   82 (317)
Q Consensus        26 ~p~~~vl~~HG~~~~~~~~~~~~~~l~~~G~~V~a~D~rG~G~s~--------~~~~~--------~~~~~~-------~   82 (317)
T Consensus        98 ~~~PvvIFSHGlgg~R~~yS~~~eeLAS~GyVV~aidH~d~Sa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~q  177 (372)
T pfam03403        98 EKYPLIVFSHGLGAFRTIYSAICIELASHGFVVAAVEHRDRSASATYFFKDKNAAEVEEPSWIYLRDVNAEEEFKIRNEQ  177 (372)
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf             98748998899876256789999998718329997156788640377547776654665421201355641568888899


Q ss_pred             HHHHHHHHHHHHHHHHHH----------------------CCCCEEEEEECCCCHHHHHHHHHHCCHHHHEHEECCCCCC
Q ss_conf             999999999999999985----------------------5995599993387228999999968323213202277777
Q gi|254780274|r   83 DTTIVCDVMKLRTLISEK----------------------HGNTSVLLFGYSLGTIIALSTLLKYPQKFSGIALWNLDLC  140 (317)
Q Consensus        83 ~~~~~~d~~~~~~~~~~~----------------------~~~~~v~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~  140 (317)
T Consensus       178 v~~R~~e~~~vl~~l~~l~~g~~~~~~~~~~~~~~~l~g~lD~~~I~~~GHSfGGATa~~~l~~D-~R~~agI~LDgwm~  256 (372)
T pfam03403       178 VGQRAQECSKALSIILQIDLGTPVENVLDSDFDLQQLKGNLDTSKIAVIGHSFGGATVIQSLSED-TRFRCGIALDAWMY  256 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHC-CCCCEEEECCCCCC
T ss_conf             99999999999999998525885311246654567760545646357985340379999998618-77137984155236