HHsearch alignment for GI: 254780274 and conserved domain: pfam09994
>pfam09994 DUF2235 Uncharacterized conserved protein (DUF2235). This domain, found in various hypothetical bacterial proteins, has no known function.
Probab=90.60 E-value=1.2 Score=23.16 Aligned_cols=95 Identities=12% Similarity=0.140 Sum_probs=54.4
Q ss_pred CEEEEEECCCCCCH------HHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 67999988687898------889999999998698999958602088553678766655639999999999999999855
Q gi|254780274|r 28 RAIILACQSIEENI------EDYNDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKLRTLISEKH 101 (317)
Q Consensus 28 ~~~vl~~HG~~~~~------~~~~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 101 (317)
T Consensus 1 k~iiv~~DGT~n~~~~~~~~TNV~rL~~~~~~~~~~q~~~Y~~GVGT~~~~~~-~~~g~a~G~g~~~~i~~Ay~fl~~~y 79 (261)
T pfam09994 1 KRLVLCFDGTGNNLEGDAPPSNVAKLFRALDRSGPPQIVYYDPGVGTSGSRLD-KALGGAFGSGLDRNVREAYRFLARNY 79 (261)
T ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHH-HHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 91999962899989999988899999998614798769997489847775203-33112544027999999999999837
Q ss_pred -CCCEEEEEECCCCHHHHHHHHH
Q ss_conf -9955999933872289999999
Q gi|254780274|r 102 -GNTSVLLFGYSLGTIIALSTLL 123 (317)
Q Consensus 102 -~~~~v~lvGhS~GG~ia~~~a~ 123 (317)
T Consensus 80 ~~gD~I~lFGFSRGA~tAR~la~ 102 (261)
T pfam09994 80 RPGDEIYLFGFSRGAYTARALAG 102 (261)
T ss_pred CCCCEEEEEECCCCHHHHHHHHH
T ss_conf 89988999503542899999998