HHsearch results for GI: 254780275 and protein with PDBid: 1wjx_A
>1wjx_A Small protein B, SSRA-binding protein; RNA binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: b.111.1.1 PDB: 2czj_A*
Probab=100.00 E-value=0 Score=353.54 Aligned_cols=121 Identities=53% Similarity=0.859 Sum_probs=119.1
Q ss_pred EEEEECCEEEEEEEEEEEECCEEEEEHHHHHHHHCCCEEEEEEEEEECCEEEEEECCCCCHHCCCCCCCCCHHHHHHHCC
Q ss_conf 89841233310257665622417750436667629820011158865660777403037200023321100013455303
Q gi|254780275|r 13 VVSDNRKARYNYHIVRSFEAGIVLTGTEVKSLRVSKVNISDSYATFENDEIWLTNSYIPEYLQANRFNHYPRRNRKLLLS 92 (159)
Q Consensus 13 ii~~NkkA~~~Y~i~e~~eAGIvL~G~EVKSiR~g~v~l~~sy~~~~~~E~~L~n~~I~~y~~~~~~~~~p~R~RKLLL~ 92 (159)
+|++||||+|||+|+|+|||||||+||||||||+|++||.||||.+++||+||.||||+||.+++.++|||+|+||||||
T Consensus 2 pI~~NkkA~~dY~i~e~~eAGivL~G~EVKSiR~g~~~i~~syv~~~~~E~~L~n~~I~~y~~~~~~~~~p~R~RKLLL~ 81 (122)
T 1wjx_A 2 PVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLH 81 (122)
T ss_dssp -CEECHHHHHHEEEEEEEEEEECCCTTHHHHHHTTCEECTTCEEEEETTEEEEESCEECC--------CCTTCCEEEECC
T ss_pred CCCCCCCCCCCEEEEEEEEEEEEEEEEEEHHHHCCCCCCCCCEEEEECCEEEEEEEEECCHHCCCCCCCCCCCHHHHHHH
T ss_conf 63326646431468478998789931061526749977240189998997999966752600264132365412554540
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEEECCC
Q ss_conf 89999999863038933999963780798199999872243
Q gi|254780275|r 93 KREIHRLYAAVRRDGMTLVPMKIYFNAKGLAKIDLALAQGK 133 (159)
Q Consensus 93 k~EI~kl~~~~~~kG~TiVPlkly~~~~g~~Kv~IalaKGK 133 (159)
|+||.+|.+.++++|+|||||++||+++|+|||+|||||||
T Consensus 82 k~EI~kl~~~~~~kG~TiVPl~ly~~~~g~iKveIalakGK 122 (122)
T 1wjx_A 82 KHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK 122 (122)
T ss_dssp HHHHHHHTTTSSCTTEEEEEEEEEECTTCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEEECCC
T ss_conf 99999999897469858998472791799899999986389