HHSEARCH alignment of GI: 254780275 and SCOP domain: d1wjxa_

Alignment
>d1wjxa_ b.111.1.1 (A:) Small protein B (SmpB) {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=353.59  Aligned_cols=120  Identities=53%  Similarity=0.871  Sum_probs=118.1

Q ss_pred             EEEECCEEEEEEEEEEEECCEEEEEHHHHHHHHCCCEEEEEEEEEECCEEEEEECCCCCHHCCCCCCCCCHHHHHHHCCH
Q ss_conf             98412333102576656224177504366676298200111588656607774030372000233211000134553038
Q gi|254780275|r   14 VSDNRKARYNYHIVRSFEAGIVLTGTEVKSLRVSKVNISDSYATFENDEIWLTNSYIPEYLQANRFNHYPRRNRKLLLSK   93 (159)
Q Consensus        14 i~~NkkA~~~Y~i~e~~eAGIvL~G~EVKSiR~g~v~l~~sy~~~~~~E~~L~n~~I~~y~~~~~~~~~p~R~RKLLL~k   93 (159)
                      |++||||+|||+|+|+|||||||+||||||||+|++||.||||.+++||+||.||||+||.+++.++|||+|+|||||||
T Consensus         1 I~~NkkA~~dY~i~e~~eAGivL~G~EVKSiR~g~~~l~~sy~~~~~~E~~L~n~~I~~y~~~~~~~~~p~R~RKLLL~k   80 (120)
T d1wjxa_           1 VLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHK   80 (120)
T ss_dssp             CEECHHHHHHEEEEEEEEEEECCCTTHHHHHHTTCEECTTCEEEEETTEEEEESCEECC--------CCTTCCEEEECCH
T ss_pred             CCCCCCCCCCEEEEEEEEEEEEEEEHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCHHCCCCCCCCCCCCHHHHCCH
T ss_conf             96576232204673779987899107079898577883740799975938999412346001565456765324221559


Q ss_pred             HHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEEECCC
Q ss_conf             9999999863038933999963780798199999872243
Q gi|254780275|r   94 REIHRLYAAVRRDGMTLVPMKIYFNAKGLAKIDLALAQGK  133 (159)
Q Consensus        94 ~EI~kl~~~~~~kG~TiVPlkly~~~~g~~Kv~IalaKGK  133 (159)
                      +||.+|.+.++++|+|||||++||+++|+|||+|||||||
T Consensus        81 ~EI~kl~~~~~~kG~TiVPl~ly~~~~g~iKveIaLakGK  120 (120)
T d1wjxa_          81 HELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK  120 (120)
T ss_dssp             HHHHHHTTTSSCTTEEEEEEEEEECTTCCEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHCCCEEEEEHHHHCCCCCEEEEEEEEECCC
T ss_conf             9999999898559879998358084799899999986289


SCOP domain information

class: All beta proteins
fold: Small protein B (SmpB)
superfamily: Small protein B (SmpB)
family: Small protein B (SmpB)
domain: Small protein B (SmpB)
species: Thermus thermophilus [TaxId: 274]