RPSBLAST alignment of GI: 254780275 and protein with PDBid: 1j1h
>1j1h_A Small protein B; SMPB, SSRA associated protein, OB fold, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Thermus thermophilus} SCOP: b.111.1.1 Length = 144
Score = 189 bits (481), Expect = 3e-49
Identities = 71/143 (49%), Positives = 96/143 (67%)
Query: 12 KVVSDNRKARYNYHIVRSFEAGIVLTGTEVKSLRVSKVNISDSYATFENDEIWLTNSYIP 71
V +NR+AR++Y I+ ++EAGI L GTEVKSLR KV+ + S+A FE+ E++L N YI
Sbjct: 2 APVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIA 61
Query: 72 EYLQANRFNHYPRRNRKLLLSKREIHRLYAAVRRDGMTLVPMKIYFNAKGLAKIDLALAQ 131
Y + + N PRR RKLLL K E+ RL V + G+TLVP+KIYFN +G AK+ L LA+
Sbjct: 62 PYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLAR 121
Query: 132 GKKNYDKRETEKKRDWDRQKHRI 154
GKK Y+KR +KK R +
Sbjct: 122 GKKAYEKRREDKKEAVRRALEEL 144