HHsearch alignment for GI: 254780276 and conserved domain: CHL00200

Probab=92.67  E-value=1  Score=25.89  Aligned_cols=64  Identities=25%  Similarity=0.400  Sum_probs=46.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCC------------------CHHHHHHHHHHHHHHHCCCCEE--E
Q ss_conf             0367410278999975343210244320012343343------------------1788999999987530233012--1
Q gi|254780276|r   74 MAGIGSNNTRESVELAQYAHSIGADALLVVIPYYNKP------------------NRRGLLAHFGEIATTVSSPIYI--Y  133 (292)
Q Consensus        74 i~gv~~~~~~~~i~~a~~a~~~Gad~i~v~~P~~~~~------------------~~~~i~~~~~~i~~~~~~pi~i--Y  133 (292)
T Consensus        20 y~taG~P~~e~s~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~~AL~~G~~~~~~~~~v~~~r~~~~~PivlMtY   99 (263)
T CHL00200         20 FITAGDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVNGEIKAPIVIFTY   99 (263)
T ss_pred             EECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             87073898789999999999769999997898888666589999999999977987778999999986067998899862


Q ss_pred             ECHH
Q ss_conf             0011
Q gi|254780276|r  134 NNPS  137 (292)
Q Consensus       134 n~P~  137 (292)
T Consensus       100 ~N~i  103 (263)
T CHL00200        100 YNPV  103 (263)
T ss_pred             HHHH
T ss_conf             0688