HHsearch alignment for GI: 254780276 and conserved domain: PRK04147
>PRK04147 N-acetylneuraminate lyase; Provisional.
Probab=100.00 E-value=0 Score=495.35 Aligned_cols=286 Identities=27% Similarity=0.410 Sum_probs=273.0
Q ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 30011120177389888689999999999997-69989998672325010899999998654311012344300367410
Q gi|254780276|r 2 FRGSIPALITPFTKGNLIDEDAFVEHIEWQIT-EGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSN 80 (292)
Q Consensus 2 ~~Gi~~~~~TPf~~d~~iD~~~~~~~i~~l~~-~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~ 80 (292)
T Consensus 4 l~Gv~~~~~TPF~~dg~iD~~~l~~~v~~~i~~~Gv~Gi~~~GstGE~~~Ls~~Er~~l~~~~~~~~~~r~pvi~gv~~~ 83 (294)
T PRK04147 4 LKGVYAALLTPFDEDGQIDEQGLRQLVRFNIEKQGIDGLYVGGSTGEAFLLSTEERKQVLEIVAEEAKGKIKLIAQVGSV 83 (294)
T ss_pred CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 80655504367896859699999999999998779989997951316434899999999999999818973276347888
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHH
Q ss_conf 27899997534321024432001234334317889999999875302330121001111121110689997432030233
Q gi|254780276|r 81 NTRESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVG 160 (292)
Q Consensus 81 ~~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~g 160 (292)
T Consensus 84 st~~ai~~a~~a~~~Gad~v~~~pP~y~~~~~~~i~~~f~~va~a~~~pi~iYn~P~~tg~~~~~~~l~~L~-~~~~i~g 162 (294)
T PRK04147 84 NTAEAQELAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSADNPMIVYNIPALTGVNLSLDQFNELF-TLPKIIG 162 (294)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHH-CCCCEEE
T ss_conf 889999999999975998899727867789989999999999850499778875675416788999999995-6899889
Q ss_pred HHCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 10012211358999973598403201322100124320334455222232110024444431178827999999999999
Q gi|254780276|r 161 VKDATGKIELVSEQRLSCGFDFIQLSGEDSSALGFNAHGGVGCISVTANVVPRICAEFQQAMIRGDYRQALLYQDKLMPL 240 (292)
Q Consensus 161 iK~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~G~~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l~~~l~~l 240 (292)
T Consensus 163 iK~s~~d~~~~~~i~~~~~~~-~v~~G~d~~~~~~~~~Ga~G~i~~~~n~~p~~~~~l~~~~~~gd~~~A~~l~~~~~~~ 241 (294)
T PRK04147 163 VKQTAGDLYQLERIRKAFPDK-LIYNGFDEMFLSGLLAGADGAIGSTYNVNGWRARQIFEAAKAGDIQEAQELQHECNDV 241 (294)
T ss_pred EEECCCCHHHHHHHHHHCCCE-EEEECCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 992889999999999748984-9995865879999987996999447986789999999999878999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999842689389999999869889987678888987989999999999855
Q gi|254780276|r 241 HQALFMEPAVCCVKYALSRLGRNVSLAVRSPMVSTLEKDTMIAIDQALERL 291 (292)
Q Consensus 241 ~~~~~~~~~~~~~K~~l~~~G~~~~~~~R~Pl~~~~~~e~~~~i~~~l~~l 291 (292)
T Consensus 242 ~~~~~~~g~~~~~K~~l~l~G~~-~g~~R~Pl~~l-~~~~~~~l~~~l~~~ 290 (294)
T PRK04147 242 IDLLIKNGVYPGLKEILHYMGVD-AGLCRKPFKPV-DEKYLPALKALAAKY 290 (294)
T ss_pred HHHHHCCCCHHHHHHHHHHCCCC-CCCCCCCCCCC-CHHHHHHHHHHHHHH
T ss_conf 99997048769999999976999-99989898999-999999999999998