HHsearch alignment for GI: 254780276 and conserved domain: PRK10415

>PRK10415 tRNA-dihydrouridine synthase B; Provisional.
Probab=92.21  E-value=1.1  Score=25.50  Aligned_cols=143  Identities=18%  Similarity=0.184  Sum_probs=98.8

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEC----------CCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCC----CCCCCHHHHH
Q ss_conf             89999999999997699899986----------723250108999999986543110123443003----6741027899
Q gi|254780276|r   20 DEDAFVEHIEWQITEGSGGLVPA----------GTTGESSTLSHEEHCRIIELCVKTVASRVPVMA----GIGSNNTRES   85 (292)
Q Consensus        20 D~~~~~~~i~~l~~~gv~gi~~~----------G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~----gv~~~~~~~~   85 (292)
T Consensus        75 dp~~~a~Aa~~~~~~g~~~IDiN~GCP~~kV~k~g~GsaLl~~p~~~~~iv~a~~~a~~--iPVTvKiRlG~~-~~~~~~  151 (321)
T PRK10415         75 DPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDLVKSILTEVVNAVD--VPVTLKIRTGWA-PEHRNC  151 (321)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCEEEHHCCHHHHHHHHHHHHHCCC--CCEEEEEECCCC-CCHHHH
T ss_conf             99999999998876499989431899989970798365063398999999999973448--746999846888-522439


Q ss_pred             HHHHHHHHHCCCCCCCEECC----CCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHH
Q ss_conf             99753432102443200123----43343178899999998753023301210011111211106899974320302331
Q gi|254780276|r   86 VELAQYAHSIGADALLVVIP----YYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGV  161 (292)
Q Consensus        86 i~~a~~a~~~Gad~i~v~~P----~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~gi  161 (292)
T Consensus       152 ~~~~~~~e~aG~~~itvHgRT~~q~y~g~ad---w~~i~~vk~~~~iPvi~------NGDI~~~~da~~~l~-~tg~dgv  221 (321)
T PRK10415        152 EEIAQLAEDCGIQALTIHGRTRACLFNGEAE---YDSIRAVKQKVSIPVIA------NGDITDPLKARAVLD-YTGADAL  221 (321)
T ss_pred             HHHHHHHHHCCCCEEEEEHHHHHHHHCCCCC---HHHHHHHHHCCCCCEEE------CCCCCCHHHHHHHHH-HHCCCEE
T ss_conf             9999999856988999972213443169987---79999998547997896------589199999999998-6299999


Q ss_pred             HCC---CCCHHHHHHHH
Q ss_conf             001---22113589999
Q gi|254780276|r  162 KDA---TGKIELVSEQR  175 (292)
Q Consensus       162 K~~---~~~~~~~~~~~  175 (292)
T Consensus       222 MigRgal~nPwiF~~i~  238 (321)
T PRK10415        222 MIGRAAQGRPWIFREIQ  238 (321)
T ss_pred             EECHHHHCCCHHHHHHH
T ss_conf             97566536987799999