HHsearch alignment for GI: 254780276 and conserved domain: PRK11858
>PRK11858 aksA trans-homoaconitate synthase; Reviewed.
Probab=96.01 E-value=0.088 Score=33.59 Aligned_cols=175 Identities=14% Similarity=0.099 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 86899999999999976998999867232501089999999865431101234430036741027899997534321024
Q gi|254780276|r 18 LIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQYAHSIGA 97 (292)
Q Consensus 18 ~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~~a~~~Ga 97 (292)
T Consensus 22 ~fs~~~K~~ia~~L~~~GV~~IEvG-----~P~~~~~e~~~~~~-i~~~~l-~~~i~-~~~R~~~~d----i~~a~~~g~ 89 (378)
T PRK11858 22 VFTNEEKLAIARMLDEIGVDQIEAG-----FPAVSEDEKEAIKA-IAKLGL-NASIL-AWNRAVKSD----IDASIDCGV 89 (378)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEE-----CCCCCCCHHHHHHH-HHHCCC-CCEEE-EECCCCHHH----HHHHHHCCC
T ss_conf 9999999999999998198999994-----77778348999999-985679-84588-740357877----999985796
Q ss_pred CCCCEECCCC-------CCCCHHHHHHHHHHHHHHH-CCCC-EEEECHHHCCCCCCHHHHHHHHHHC----CHHHHHHCC
Q ss_conf 4320012343-------3431788999999987530-2330-1210011111211106899974320----302331001
Q gi|254780276|r 98 DALLVVIPYY-------NKPNRRGLLAHFGEIATTV-SSPI-YIYNNPSRTVIEMDVDTMAELAATY----PNIVGVKDA 164 (292)
Q Consensus 98 d~i~v~~P~~-------~~~~~~~i~~~~~~i~~~~-~~pi-~iYn~P~~~g~~~~~~~l~~L~~~~----pni~giK~~ 164 (292)
T Consensus 90 ~~v~i~~~~Sd~h~~~~l~~t~~e~l~~~~~~v~~Ak~~Gl~v~f~~eD~~r--~~~~~l~~~~~~a~~~Gad~I~l~DT 167 (378)
T PRK11858 90 DAVHIFIATSDIHLKYKLKKTREEVLERLVEAVEYAKDHGLYVSFSAEDASR--TDLDFLIEAAKAAEEAGADRVRFCDT 167 (378)
T ss_pred CEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC--CCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 9899996067999999968998999999999999999769869994401256--89999999999999749989996365
Q ss_pred CCC--HHH----HHHHHHHCCCCEEECCCCCCC------HHHHHHHCCC---CCCCCC
Q ss_conf 221--135----899997359840320132210------0124320334---455222
Q gi|254780276|r 165 TGK--IEL----VSEQRLSCGFDFIQLSGEDSS------ALGFNAHGGV---GCISVT 207 (292)
Q Consensus 165 ~~~--~~~----~~~~~~~~~~~~~v~~G~~~~------~~~~~~~G~~---G~is~~ 207 (292)
T Consensus 168 ~G~~~P~~v~~~v~~l~~~~~~~i~~-H~HNd~GlAvANalaAv~AGa~~v~~Tv~Gi 224 (378)
T PRK11858 168 VGILDPFTMYELVKELVEAVDIPIEV-HCHNDFGMATANAIAGIEAGATQVHTTVNGL 224 (378)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEE-EEECCCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 56669999999999999726985599-9707755599999999980999899875446