HHsearch alignment for GI: 254780276 and conserved domain: TIGR00683

>TIGR00683 nanA N-acetylneuraminate lyase; InterPro: IPR005264 N-acetylneuraminate lyase catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetyl-D-mannosamine. The enzyme plays an important role in the regulation of sialic acid metabolism in bacteria..
Probab=100.00  E-value=0  Score=378.60  Aligned_cols=274  Identities=25%  Similarity=0.367  Sum_probs=261.4

Q ss_pred             CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             3001112017738988868999999999999769-989998672325010899999998654311012344300367410
Q gi|254780276|r    2 FRGSIPALITPFTKGNLIDEDAFVEHIEWQITEG-SGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSN   80 (292)
Q Consensus         2 ~~Gi~~~~~TPf~~d~~iD~~~~~~~i~~l~~~g-v~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~   80 (292)
T Consensus         1 L~G~~~ALL~~F~~~~~~~~~~LR~~~~~NI~~~k~DGLYVGGSTGE~F~~S~~E~~~~l~I~~~EAK~~I~LIA~VG~V   80 (294)
T TIGR00683         1 LKGVFAALLVSFDEDQALDKKSLRRLVRFNIDKGKVDGLYVGGSTGEAFVLSLEEKKEVLRIVKDEAKDKIKLIAQVGSV   80 (294)
T ss_pred             CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             91025334066331100437667899987310142131573563156775317889999999987302502221010520


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEECHHHCCCCCCHHHHHHHHHHCCHHH
Q ss_conf             27899997534321024432001234334317889999999875302-33012100111112111068999743203023
Q gi|254780276|r   81 NTRESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVS-SPIYIYNNPSRTVIEMDVDTMAELAATYPNIV  159 (292)
Q Consensus        81 ~~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~-~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~  159 (292)
T Consensus        81 ~~~E~~~L~~~A~~~GyD~~SAVTPFYY~FSF~E~~~~Y~~II~~~~G~~M~VY~IP~L~GV~l~~~Q~~~L~~-~P~V~  159 (294)
T TIGR00683        81 SLKEAVELAKYAKRLGYDALSAVTPFYYKFSFEEIKDYYDAIIDEADGLNMVVYSIPALSGVKLTLDQINELVK-LPKVL  159 (294)
T ss_pred             CHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCE
T ss_conf             37889999998887367111203666678873677778999985248982378745320121221888888751-78721


Q ss_pred             HHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             31001221135899997359840320132210012432033445522223211002444443117882799999999999
Q gi|254780276|r  160 GVKDATGKIELVSEQRLSCGFDFIQLSGEDSSALGFNAHGGVGCISVTANVVPRICAEFQQAMIRGDYRQALLYQDKLMP  239 (292)
Q Consensus       160 giK~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~G~~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l~~~l~~  239 (292)
T Consensus       160 ~~K~T~GDlY~lE~~~~~~P~-~~~y~GyDE~~~~~~~~G~DG~IGSTyN~~G~R~~~I~~~~K~G~~~~A~~~Q~~~N~  238 (294)
T TIGR00683       160 ALKFTAGDLYLLERLKKEYPD-LLLYAGYDEIFLSALLLGVDGAIGSTYNVNGVRARQIVKLLKEGDLAEALKLQTVTND  238 (294)
T ss_pred             EEEECCCHHHHHHHHHHHCCC-CEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             452040058899999875563-0120462789887886257767655100131118889998607877899999888889


Q ss_pred             HHHHHHCCCCHHHHHHHHH-HCCCCCCCCCCCCCCCCCCH
Q ss_conf             9999842689389999999-86988998767888898798
Q gi|254780276|r  240 LHQALFMEPAVCCVKYALS-RLGRNVSLAVRSPMVSTLEK  278 (292)
Q Consensus       240 l~~~~~~~~~~~~~K~~l~-~~G~~~~~~~R~Pl~~~~~~  278 (292)
T Consensus       239 ~I~~~~~~G~y~~~K~~L~yl~~V~~~-~CR~P~~Pvd~K  277 (294)
T TIGR00683       239 LIDLLLKTGLYLTLKELLKYLDVVDVG-LCRKPFTPVDEK  277 (294)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHH
T ss_conf             999998504478999999885124667-678999852011