HHsearch alignment for GI: 254780276 and conserved domain: TIGR03249
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=100.00 E-value=0 Score=473.95 Aligned_cols=285 Identities=29% Similarity=0.468 Sum_probs=262.4
Q ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 30011120177389888689999999999997699899986723250108999999986543110123443003674102
Q gi|254780276|r 2 FRGSIPALITPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNN 81 (292)
Q Consensus 2 ~~Gi~~~~~TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~ 81 (292)
T Consensus 6 ~sGi~~a~vTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~g~~~vi~gvg~-~ 84 (296)
T TIGR03249 6 GSGLLSFPVTPFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGG-N 84 (296)
T ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCH-H
T ss_conf 834441024866898787999999999999977999899783051666589999999999999983898415127861-2
Q ss_pred HHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHH
Q ss_conf 78999975343210244320012343343178899999998753023301210011111211106899974320302331
Q gi|254780276|r 82 TRESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGV 161 (292)
Q Consensus 82 ~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~gi 161 (292)
T Consensus 85 t~~ai~la~~a~~~Gad~v~v~pPyy~~~~~~~l~~~f~~ia~a~~~pi~lYn~---~~~~~~~~~l~~L~~~~p~i~gi 161 (296)
T TIGR03249 85 TSDAIEIARLAEKAGADGYLLLPPYLINGEQEGLYAHVEAVCESTDLGVIVYQR---DNAVLNADTLERLADRCPNLVGF 161 (296)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC---CCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 999999999998759997897799889999999999999999715997787307---78787999999998157987999
Q ss_pred HCCCCCHHHHHHHHHHCCCCEEECCC---CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH-H
Q ss_conf 00122113589999735984032013---2210012432033445522223211002444443117882799999999-9
Q gi|254780276|r 162 KDATGKIELVSEQRLSCGFDFIQLSG---EDSSALGFNAHGGVGCISVTANVVPRICAEFQQAMIRGDYRQALLYQDK-L 237 (292)
Q Consensus 162 K~~~~~~~~~~~~~~~~~~~~~v~~G---~~~~~~~~~~~G~~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l~~~-l 237 (292)
T Consensus 162 K~s~~d~~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~G~~g~i~~~~n~~P~~~~~l~~a~~~gd~~~a~~l~~~~~ 241 (296)
T TIGR03249 162 KDGIGDMEQMIEITQRLGDRLGYLGGMPTAEVTAPAYLPLGVTSYSSAIFNFIPHIARAFYEALRRGDHATVGEIYKEFI 241 (296)
T ss_pred EECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 97766899999999973997279738971289999999389989962465675999999999998777999999999999
Q ss_pred HHHHHHHHCC--CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 9999998426--893899999998698899876788889879899999999998559
Q gi|254780276|r 238 MPLHQALFME--PAVCCVKYALSRLGRNVSLAVRSPMVSTLEKDTMIAIDQALERLG 292 (292)
Q Consensus 238 ~~l~~~~~~~--~~~~~~K~~l~~~G~~~~~~~R~Pl~~~~~~e~~~~i~~~l~~lG 292 (292)
T Consensus 242 ~~~~~~~~~~~~~~~~~iK~al~~~G~~~g-~~R~Pl~~lt-~ee~~~l~~~L~~~G 296 (296)
T TIGR03249 242 LPINEIRNRKKGYAVSIIKAGMEIVGLPAG-PVRPPLTDLT-KEEYAQLEVILKKAG 296 (296)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCC-HHHHHHHHHHHHHCC
T ss_conf 999998734477607999999998699999-9599999989-999999999999559