HHsearch alignment for GI: 254780276 and conserved domain: TIGR03249

>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=100.00  E-value=0  Score=473.95  Aligned_cols=285  Identities=29%  Similarity=0.468  Sum_probs=262.4

Q ss_pred             CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf             30011120177389888689999999999997699899986723250108999999986543110123443003674102
Q gi|254780276|r    2 FRGSIPALITPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNN   81 (292)
Q Consensus         2 ~~Gi~~~~~TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~   81 (292)
T Consensus         6 ~sGi~~a~vTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~g~~~vi~gvg~-~   84 (296)
T TIGR03249         6 GSGLLSFPVTPFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGG-N   84 (296)
T ss_pred             CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCH-H
T ss_conf             834441024866898787999999999999977999899783051666589999999999999983898415127861-2


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHH
Q ss_conf             78999975343210244320012343343178899999998753023301210011111211106899974320302331
Q gi|254780276|r   82 TRESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGV  161 (292)
Q Consensus        82 ~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~gi  161 (292)
T Consensus        85 t~~ai~la~~a~~~Gad~v~v~pPyy~~~~~~~l~~~f~~ia~a~~~pi~lYn~---~~~~~~~~~l~~L~~~~p~i~gi  161 (296)
T TIGR03249        85 TSDAIEIARLAEKAGADGYLLLPPYLINGEQEGLYAHVEAVCESTDLGVIVYQR---DNAVLNADTLERLADRCPNLVGF  161 (296)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC---CCCCCCHHHHHHHHHCCCCEEEE
T ss_conf             999999999998759997897799889999999999999999715997787307---78787999999998157987999


Q ss_pred             HCCCCCHHHHHHHHHHCCCCEEECCC---CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH-H
Q ss_conf             00122113589999735984032013---2210012432033445522223211002444443117882799999999-9
Q gi|254780276|r  162 KDATGKIELVSEQRLSCGFDFIQLSG---EDSSALGFNAHGGVGCISVTANVVPRICAEFQQAMIRGDYRQALLYQDK-L  237 (292)
Q Consensus       162 K~~~~~~~~~~~~~~~~~~~~~v~~G---~~~~~~~~~~~G~~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l~~~-l  237 (292)
T Consensus       162 K~s~~d~~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~G~~g~i~~~~n~~P~~~~~l~~a~~~gd~~~a~~l~~~~~  241 (296)
T TIGR03249       162 KDGIGDMEQMIEITQRLGDRLGYLGGMPTAEVTAPAYLPLGVTSYSSAIFNFIPHIARAFYEALRRGDHATVGEIYKEFI  241 (296)
T ss_pred             EECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             97766899999999973997279738971289999999389989962465675999999999998777999999999999


Q ss_pred             HHHHHHHHCC--CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9999998426--893899999998698899876788889879899999999998559
Q gi|254780276|r  238 MPLHQALFME--PAVCCVKYALSRLGRNVSLAVRSPMVSTLEKDTMIAIDQALERLG  292 (292)
Q Consensus       238 ~~l~~~~~~~--~~~~~~K~~l~~~G~~~~~~~R~Pl~~~~~~e~~~~i~~~l~~lG  292 (292)
T Consensus       242 ~~~~~~~~~~~~~~~~~iK~al~~~G~~~g-~~R~Pl~~lt-~ee~~~l~~~L~~~G  296 (296)
T TIGR03249       242 LPINEIRNRKKGYAVSIIKAGMEIVGLPAG-PVRPPLTDLT-KEEYAQLEVILKKAG  296 (296)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCC-HHHHHHHHHHHHHCC
T ss_conf             999998734477607999999998699999-9599999989-999999999999559