HHsearch alignment for GI: 254780276 and conserved domain: cd00564
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=92.62 E-value=0.87 Score=26.34 Aligned_cols=161 Identities=19% Similarity=0.196 Sum_probs=88.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHH
Q ss_conf 0177389888689999999999997699899986723250108999999986543110123-443003674102789999
Q gi|254780276|r 9 LITPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVAS-RVPVMAGIGSNNTRESVE 87 (292)
Q Consensus 9 ~~TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~-r~pii~gv~~~~~~~~i~ 87 (292)
T Consensus 3 ~IT~~~----~~~~~~~~~l~~~l~~gv~~iqlR-----~k~~~~~~~~~~a~~~~~~~~~~~~~liIn----------d 63 (196)
T cd00564 3 LITDRR----LDGEDLLEVVEAALKGGVTLVQLR-----EKDLSARELLELARALRELCRKYGVPLIIN----------D 63 (196)
T ss_pred EECCCC----CCCCHHHHHHHHHHHCCCCEEEEC-----CCCCCHHHHHHHHHHHHHHHHHHCCEEEEC----------C
T ss_conf 988986----465149999999998599999986-----799899999999999999999809979978----------8
Q ss_pred HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHH------
Q ss_conf 75343210244320012343343178899999998753023301210011111211106899974320302331------
Q gi|254780276|r 88 LAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGV------ 161 (292)
Q Consensus 88 ~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~gi------ 161 (292)
T Consensus 64 ~~~lA~~~~~dGvHl~~---~d~~~~~~r~----~---~~~~~iiG---~S~h---~~~e~~~a~~~g~DYi~~gpvf~T 127 (196)
T cd00564 64 RVDLALAVGADGVHLGQ---DDLPVAEARA----L---LGPDLIIG---VSTH---SLEEALRAEELGADYVGFGPVFPT 127 (196)
T ss_pred HHHHHHHHCCCEEECCC---CCCCHHHHHH----H---HCCCCEEE---ECCC---CHHHHHHHHHHCCCEEEECCCCCC
T ss_conf 69999973998795584---6689999998----7---28897588---2478---899999988709993886465578
Q ss_pred --HCC---CCCHHHHHHHHHHCCCCEEECCCCC-CCHHHHHHHCCCCCC
Q ss_conf --001---2211358999973598403201322-100124320334455
Q gi|254780276|r 162 --KDA---TGKIELVSEQRLSCGFDFIQLSGED-SSALGFNAHGGVGCI 204 (292)
Q Consensus 162 --K~~---~~~~~~~~~~~~~~~~~~~v~~G~~-~~~~~~~~~G~~G~i 204 (292)
T Consensus 128 ~tK~~~~~~~g~~~l~~~~~~~~~Pv~AiGGI~~~ni~~~~~~G~~giA 176 (196)
T cd00564 128 PTKPGAGPPLGLELLREIAELVEIPVVAIGGITPENAAEVLAAGADGVA 176 (196)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEE
T ss_conf 9888877877889999999867999899858999999999980999999