HHsearch alignment for GI: 254780276 and conserved domain: cd00950
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=100.00 E-value=0 Score=515.27 Aligned_cols=284 Identities=49% Similarity=0.724 Sum_probs=274.3
Q ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 30011120177389888689999999999997699899986723250108999999986543110123443003674102
Q gi|254780276|r 2 FRGSIPALITPFTKGNLIDEDAFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCVKTVASRVPVMAGIGSNN 81 (292)
Q Consensus 2 ~~Gi~~~~~TPf~~d~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~ 81 (292)
T Consensus 1 f~Gv~~~~~TPf~~dg~iD~~~l~~~v~~l~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~ 80 (284)
T cd00950 1 FGGSITALVTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNN 80 (284)
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 98456766667887869699999999999997699989968435124248999999999999997189750775078778
Q ss_pred HHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCHHHHHHHHHHCCHHHHH
Q ss_conf 78999975343210244320012343343178899999998753023301210011111211106899974320302331
Q gi|254780276|r 82 TRESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVIEMDVDTMAELAATYPNIVGV 161 (292)
Q Consensus 82 ~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~~~~~~~l~~L~~~~pni~gi 161 (292)
T Consensus 81 t~~~i~~a~~A~~~Gadai~v~pP~y~~~s~~~l~~~~~~ia~a~~lPi~lYn~P~~tg~~l~~~~l~~L~-~~pnv~gi 159 (284)
T cd00950 81 TAEAIELTKRAEKAGADAALVVTPYYNKPSQEGLYAHFKAIAEATDLPVILYNVPGRTGVNIEPETVLRLA-EHPNIVGI 159 (284)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHH-CCCCEEEE
T ss_conf 99999999999983999899626657897999999999999755599779873764116788889999984-79998999
Q ss_pred HCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 00122113589999735984032013221001243203344552222321100244444311788279999999999999
Q gi|254780276|r 162 KDATGKIELVSEQRLSCGFDFIQLSGEDSSALGFNAHGGVGCISVTANVVPRICAEFQQAMIRGDYRQALLYQDKLMPLH 241 (292)
Q Consensus 162 K~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~G~~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l~~~l~~l~ 241 (292)
T Consensus 160 K~ss~d~~~~~~~~~~~~~~~~v~~G~d~~~~~~l~~Ga~G~i~~~~n~~P~~~~~l~~a~~~gd~~~A~~l~~~~~~l~ 239 (284)
T cd00950 160 KEATGDLDRVSELIALCPDDFAVLSGDDALTLPFLALGGVGVISVAANVAPKLMAEMVRAALAGDLEKARELHRKLLPLI 239 (284)
T ss_pred ECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCEEEEEEHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 85889899999999866987546448689999999954996998531027899999999998789999999999999999
Q ss_pred HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99842689389999999869889987678888987989999999999
Q gi|254780276|r 242 QALFMEPAVCCVKYALSRLGRNVSLAVRSPMVSTLEKDTMIAIDQAL 288 (292)
Q Consensus 242 ~~~~~~~~~~~~K~~l~~~G~~~~~~~R~Pl~~~~~~e~~~~i~~~l 288 (292)
T Consensus 240 ~~~~~~~~~~~~K~~l~~~G~~~g-~~R~Pl~~l~-~ee~~~l~~~L 284 (284)
T cd00950 240 KALFAEPNPIPVKAALALLGLISG-ELRLPLVPLS-EELRAKLRAAL 284 (284)
T ss_pred HHHHCCCCHHHHHHHHHHCCCCCC-CCCCCCCCCC-HHHHHHHHHCC
T ss_conf 999658788999999997699999-9798999999-99999999619