HHsearch alignment for GI: 254780276 and conserved domain: cd06322
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=94.23 E-value=0.58 Score=27.65 Aligned_cols=31 Identities=16% Similarity=0.093 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 8868999999999999769989998672325
Q gi|254780276|r 17 NLIDEDAFVEHIEWQITEGSGGLVPAGTTGE 47 (292)
Q Consensus 17 ~~iD~~~~~~~i~~l~~~gv~gi~~~G~tGE 47 (292)
T Consensus 37 s~~d~~~q~~~i~~li~~~vDgiIi~p~~~~ 67 (267)
T cd06322 37 ANQDLNKQLSDVEDFITKKVDAIVLSPVDSK 67 (267)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 9999999999999999749999999067610