HHsearch alignment for GI: 254780277 and conserved domain: COG1948

>COG1948 MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair].

Probab=92.33  E-value=0.17  Score=29.48  Aligned_cols=27  Identities=44%  Similarity=0.819  Sum_probs=17.0

Q ss_pred             CCCCCCCHHHHHHHHHCCCHHHHHHHH
Q ss_conf             877636024998984136789998645
Q gi|254780277|r  195 GIPGIGYKTAALLLQEYGNLENILINA  221 (976)
Q Consensus       195 Gv~GiG~KtA~~ll~~~gsle~i~~~~  221 (976)
T Consensus       186 s~pgig~~~a~~ll~~fgS~~~~~tas  212 (254)
T COG1948         186 SIPGIGPKLAERLLKKFGSVEDVLTAS  212 (254)
T ss_pred             CCCCCCHHHHHHHHHHHCCHHHHHHCC
T ss_conf             089964899999999856888776559