HHsearch alignment for GI: 254780277 and conserved domain: KOG2248
>KOG2248 consensus.
Probab=90.95 E-value=0.26 Score=28.10 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=62.8
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC-CCCCCCHHHHHHHHCCCCCC
Q ss_conf 50017889999744442022210011003212378898618866642100234554316-87667724667762244422
Q gi|254780277|r 440 TGKNTLTKEILSYLKKFFENEHFLKIGHNIKYDKLVLHRYGISMRGFEDIMLMSYVLDS-GRSSHDIASIAQKWLSYTRK 518 (976)
Q Consensus 440 ~~~~~~~~evl~~L~~lle~~~i~kIgHN~KfD~~~L~~~GI~l~~i~DTmlaayLLdp-~~~~~~L~~la~~yL~~~~~ 518 (976)
T Consensus 274 e~~t~tl~dvq~~l~~~~~~~TIL-VGHSLenDL~aLKl---~H~~ViDTa~lf~~~~g~~~~k~sLk~L~~~~L~~~Iq 349 (380)
T KOG2248 274 ENSTITLEDVQKELLELISKNTIL-VGHSLENDLKALKL---DHPSVIDTAVLFKHPTGPYPFKSSLKNLAKSYLGKLIQ 349 (380)
T ss_pred HCCCCCHHHHHHHHHHHCCCCCEE-EEECHHHHHHHHHH---HCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 258627999999999646867179-95100307889764---27742200588864889854259999999999889986
Q ss_pred CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 335654322210000001233332221111124567763
Q gi|254780277|r 519 EILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLR 557 (976)
Q Consensus 519 e~~~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~ 557 (976)
T Consensus 350 ~--~~--------------~~HdS~eDA~acm~Lv~~k~ 372 (380)
T KOG2248 350 E--GV--------------GGHDSVEDALACMKLVKLKI 372 (380)
T ss_pred C--CC--------------CCCCCHHHHHHHHHHHHHHH
T ss_conf 1--67--------------78760888999999999998