HHsearch alignment for GI: 254780277 and conserved domain: PRK00558
>PRK00558 uvrC excinuclease ABC subunit C; Validated.
Probab=97.53 E-value=0.0008 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=18.1
Q ss_pred HHHHHH---CCCHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 356440---77703567881999899999999999
Q gi|254780277|r 805 NFSIIY---GISPFRLATQLRIPRSEAADYIKRYF 836 (976)
Q Consensus 805 nfgi~Y---G~~~~~La~~l~is~~eA~~~i~~yf 836 (976)
T Consensus 573 ~Fgs~~~i~~As~eeL~~v~Gi~~~~A~~I~~~l~ 607 (609)
T PRK00558 573 HFGSLKAIKEASVEELAKVPGISKKLAEKIYEALH 607 (609)
T ss_pred HCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 70799999738999996489989999999999970