HHsearch alignment for GI: 254780277 and conserved domain: PRK05168
>PRK05168 ribonuclease T; Provisional.
Probab=98.75 E-value=5.5e-08 Score=76.85 Aligned_cols=165 Identities=14% Similarity=0.078 Sum_probs=93.0
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC---CCCCCCCCCCCEECCC------C------CCCCCCCCCC-CCC
Q ss_conf 9998668523233222433110012442010257---7665443455023137------4------4333456500-178
Q gi|254780277|r 382 QKLETIGSASFKIITDTMDAFHSKPIAIAISTLD---QKDDTSFKVETIFIDL------S------VHTSQDSTGK-NTL 445 (976)
Q Consensus 382 ~~L~~~~~ia~DtETt~ld~~~~~ivGisls~~~---~~~~~~~~~~~~yip~------~------~~~~~d~~~~-~~~ 445 (976)
T Consensus 12 ~rfr~~~pVV~D~ETTGl~p~~D~IIEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~ 91 (213)
T PRK05168 12 DRFRGFLPVVIDVETAGFNAQTDALLEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVS 91 (213)
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 98558887599830799887788558888899886378867247548898788878878866751126786532223666
Q ss_pred HHHHH----HHHHHHHCCC---CCHHHHCCCCHHHHHHH----HCCCCCC-----CCCCHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 89999----7444420222---10011003212378898----6188666-----4210023455431687667724667
Q gi|254780277|r 446 TKEIL----SYLKKFFENE---HFLKIGHNIKYDKLVLH----RYGISMR-----GFEDIMLMSYVLDSGRSSHDIASIA 509 (976)
Q Consensus 446 ~~evl----~~L~~lle~~---~i~kIgHN~KfD~~~L~----~~GI~l~-----~i~DTmlaayLLdp~~~~~~L~~la 509 (976)
T Consensus 92 ~~~al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~~---~~~L~~lc 168 (213)
T PRK05168 92 EKEALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAYG---QTVLAKAC 168 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHC---CCCHHHHH
T ss_conf 788789999999999875046756377634187499999999984997788887763358998688748---74099999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7622444223356543222100000012333322211111245677632221000134
Q gi|254780277|r 510 QKWLSYTRKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLH 567 (976)
Q Consensus 510 ~~yL~~~~~e~~~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~~~L~~~~l~~ 567 (976)
T Consensus 169 ~~~-gi~~~-----------------~~~~HrAl~DA~~tA~vFl~ll~~l~~~g~~~ 208 (213)
T PRK05168 169 QAA-GIEFD-----------------NKEAHSALYDTEKTAELFCEIVNRWKRLGGWP 208 (213)
T ss_pred HHC-CCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 986-99999-----------------97777738999999999999999999738999