HHsearch alignment for GI: 254780277 and conserved domain: PRK05168

>PRK05168 ribonuclease T; Provisional.
Probab=98.75  E-value=5.5e-08  Score=76.85  Aligned_cols=165  Identities=14%  Similarity=0.078  Sum_probs=93.0

Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC---CCCCCCCCCCCEECCC------C------CCCCCCCCCC-CCC
Q ss_conf             9998668523233222433110012442010257---7665443455023137------4------4333456500-178
Q gi|254780277|r  382 QKLETIGSASFKIITDTMDAFHSKPIAIAISTLD---QKDDTSFKVETIFIDL------S------VHTSQDSTGK-NTL  445 (976)
Q Consensus       382 ~~L~~~~~ia~DtETt~ld~~~~~ivGisls~~~---~~~~~~~~~~~~yip~------~------~~~~~d~~~~-~~~  445 (976)
T Consensus        12 ~rfr~~~pVV~D~ETTGl~p~~D~IIEIGAV~v~~~e~g~i~~~~~f~~~V~P~~g~~I~~~~~~ltGI~~~~~l~~a~~   91 (213)
T PRK05168         12 DRFRGFLPVVIDVETAGFNAQTDALLEIAAITLKMDEQGWLYPDETLHFHVEPFEGANLEPEALAFNGIDPDNPLRGAVS   91 (213)
T ss_pred             HHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf             98558887599830799887788558888899886378867247548898788878878866751126786532223666


Q ss_pred             HHHHH----HHHHHHHCCC---CCHHHHCCCCHHHHHHH----HCCCCCC-----CCCCHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             89999----7444420222---10011003212378898----6188666-----4210023455431687667724667
Q gi|254780277|r  446 TKEIL----SYLKKFFENE---HFLKIGHNIKYDKLVLH----RYGISMR-----GFEDIMLMSYVLDSGRSSHDIASIA  509 (976)
Q Consensus       446 ~~evl----~~L~~lle~~---~i~kIgHN~KfD~~~L~----~~GI~l~-----~i~DTmlaayLLdp~~~~~~L~~la  509 (976)
T Consensus        92 ~~~al~~~~~~i~~~~~~~~c~~avLVaHNA~FD~~FLn~~~~r~g~~~~P~~~~~viDTl~Lar~~~~---~~~L~~lc  168 (213)
T PRK05168         92 EKEALHEIFKPVRKGIKAAGCQRAILVAHNAHFDLGFLNAAAERTGLKRNPFHPFSTFDTATLAGLAYG---QTVLAKAC  168 (213)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHC---CCCHHHHH
T ss_conf             788789999999999875046756377634187499999999984997788887763358998688748---74099999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7622444223356543222100000012333322211111245677632221000134
Q gi|254780277|r  510 QKWLSYTRKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLH  567 (976)
Q Consensus       510 ~~yL~~~~~e~~~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~~~L~~~~l~~  567 (976)
T Consensus       169 ~~~-gi~~~-----------------~~~~HrAl~DA~~tA~vFl~ll~~l~~~g~~~  208 (213)
T PRK05168        169 QAA-GIEFD-----------------NKEAHSALYDTEKTAELFCEIVNRWKRLGGWP  208 (213)
T ss_pred             HHC-CCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             986-99999-----------------97777738999999999999999999738999