HHsearch alignment for GI: 254780277 and conserved domain: PRK06310

>PRK06310 DNA polymerase III subunit epsilon; Validated.
Probab=99.06  E-value=3.8e-10  Score=92.60  Aligned_cols=182  Identities=16%  Similarity=0.248  Sum_probs=111.8

Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEC----CCC------CCCCCCCCCCCCCHHHHHHHH
Q ss_conf             9866852323322243311001244201025776654434550231----374------433345650017889999744
Q gi|254780277|r  384 LETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFI----DLS------VHTSQDSTGKNTLTKEILSYL  453 (976)
Q Consensus       384 L~~~~~ia~DtETt~ld~~~~~ivGisls~~~~~~~~~~~~~~~yi----p~~------~~~~~d~~~~~~~~~evl~~L  453 (976)
T Consensus         4 l~~~~yvv~D~ETTGl~~~~DrIIEI~~vkv~~~~i~~~~--~~linP~~~I~~~~~~ihGIt~emV~d~P~f~ev~~~~   81 (250)
T PRK06310          4 LKDTEFVCLDCETTGLDVKKDRIIEFAAIRFTFDEVIDSM--EFLINPERVVSAESQRIHHISDAMLRDKPKIAEVFPQI   81 (250)
T ss_pred             CCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCEEEEEE--EEEECCCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHH
T ss_conf             6689889997337997999962799999999999886889--99989289799889876154899984699999999999


Q ss_pred             HHHHCCCCCHHHHCCCCHHHHHHH----HCCCCCC--C--CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             442022210011003212378898----6188666--4--2100234554316876677246677622444223356543
Q gi|254780277|r  454 KKFFENEHFLKIGHNIKYDKLVLH----RYGISMR--G--FEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRK  525 (976)
Q Consensus       454 ~~lle~~~i~kIgHN~KfD~~~L~----~~GI~l~--~--i~DTmlaayLLdp~~~~~~L~~la~~yL~~~~~e~~~~~k  525 (976)
T Consensus        82 ~~fi~~~~i-lVaHNa~FD~~fL~~e~~r~g~~~~~~~~~~IDTl~lAr~~~-~~~~~~L~~L~~~~-~i~~~-------  151 (250)
T PRK06310         82 KGFFKEGDY-IVGHSVGFDLQVLAQEAERIGETFLSKHYYIIDTLRLAKEYG-DSPNNSLEALAVHF-NVPYD-------  151 (250)
T ss_pred             HHHHCCCCE-EEEECHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHCC-CCCCCHHHHHHHHC-CCCCC-------
T ss_conf             999679999-999384557999999999769986656795784999997567-65456099999970-99998-------


Q ss_pred             CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHCCCCCCCC
Q ss_conf             22210000001233332221111124567763222100013457886075-0123322101431005
Q gi|254780277|r  526 SSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERLDKP-MIDVVSQMEITGIQID  591 (976)
Q Consensus       526 ~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~~~L~~~~l~~l~~~iE~P-l~~vLa~ME~~Gi~vD  591 (976)
T Consensus       152 ------------~aHrAl~Da~aTa~vf~~l~~r~~~--~e~~~~i~~~p~~~~~f~FGKhKGk~v~  204 (250)
T PRK06310        152 ------------GNHRAMKDVEININVFKHLCKRFRT--LEQLKQVLSKPIKMKYMPLGKHKGRLFS  204 (250)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHCCCCCCCEECCCCCCCEEHH
T ss_conf             ------------6668199999999999999985537--9999998619463420057784988899