HHsearch alignment for GI: 254780277 and conserved domain: PRK07246

>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=98.91  E-value=3.9e-09  Score=85.20  Aligned_cols=154  Identities=14%  Similarity=0.137  Sum_probs=105.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC----CCEECCCCCCCCC---CCCCC-CCCHHHHHHHHHHHHC
Q ss_conf             68523233222433110012442010257766544345----5023137443334---56500-1788999974444202
Q gi|254780277|r  387 IGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKV----ETIFIDLSVHTSQ---DSTGK-NTLTKEILSYLKKFFE  458 (976)
Q Consensus       387 ~~~ia~DtETt~ld~~~~~ivGisls~~~~~~~~~~~~----~~~yip~~~~~~~---d~~~~-~~~~~evl~~L~~lle  458 (976)
T Consensus         7 ~~~~vvDlETTG~~~~-~~Iiqi~~v~~~~~~i~~~f~t~vnP~~~ip~~I~~LTgI~~~~v~~ap~f~~v~~~~~~~l~   85 (820)
T PRK07246          7 RKYAVVDLEATGAGPN-ASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAQAPDFSQVAHHIYQLIE   85 (820)
T ss_pred             CCEEEEEEECCCCCCC-CCEEEEEEEEEECCEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHC
T ss_conf             7189999887898999-877999999999999989987311889979978886469898998529998999999999967


Q ss_pred             CCCCHHHHCCCCHHHHHHHH----CCCCCCC-CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             22100110032123788986----1886664-210023455431687667724667762244422335654322210000
Q gi|254780277|r  459 NEHFLKIGHNIKYDKLVLHR----YGISMRG-FEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRKSSIPIDKI  533 (976)
Q Consensus       459 ~~~i~kIgHN~KfD~~~L~~----~GI~l~~-i~DTmlaayLLdp~~~~~~L~~la~~yL~~~~~e~~~~~k~~~~~~~i  533 (976)
T Consensus        86 ~~--~~VaHNv~FD~~fl~~~~~~~g~~~~~~~~DTv~La~i~~P~~~~y~L~~L~~~-l~~~~~---------------  147 (820)
T PRK07246         86 DC--IFVAHNVKFDANLLAEALFLEGYELRTPRVDTVELAQVFFPRLEKYSLSHLSRQ-LNIDLA---------------  147 (820)
T ss_pred             CC--EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH-CCCCCC---------------
T ss_conf             98--599837201699999999975898899826099999997798788888999997-399999---------------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             001233332221111124567763222100
Q gi|254780277|r  534 SDSQVQEHAIENSNVILQLWLLLRPKLIVE  563 (976)
Q Consensus       534 ~~e~~~~Yaa~Da~~t~~L~~~l~~~L~~~  563 (976)
T Consensus       148 ---~-~HrA~~Da~ata~l~~~l~~~l~~l  173 (820)
T PRK07246        148 ---E-AHTAIADARATAILFLRLLQKIESL  173 (820)
T ss_pred             ---C-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             ---8-8761889999999999999998619