HHsearch alignment for GI: 254780277 and conserved domain: PRK08858

Probab=98.75  E-value=1.4e-08  Score=81.14  Aligned_cols=148  Identities=11%  Similarity=0.221  Sum_probs=89.4

Q ss_pred             CCCCCCCCCCCCCCCC------CCCCCCEEECCCCCCCCCCCCCCEECCCCC----------CCCCCCCCCCCCHHHHHH
Q ss_conf             8523233222433110------012442010257766544345502313744----------333456500178899997
Q gi|254780277|r  388 GSASFKIITDTMDAFH------SKPIAIAISTLDQKDDTSFKVETIFIDLSV----------HTSQDSTGKNTLTKEILS  451 (976)
Q Consensus       388 ~~ia~DtETt~ld~~~------~~ivGisls~~~~~~~~~~~~~~~yip~~~----------~~~~d~~~~~~~~~evl~  451 (976)
T Consensus        11 R~VVlDtETTGl~~~~~~~~~gdRIIEIgaV~i~~~~~t~~~f-~~~InP~r~Ip~~a~~ihGIT~e~L~daP~F~eI~~   89 (246)
T PRK08858         11 RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHF-HVYLKPDREIQPEAIDVHGITDEFLVDKPEYKDVHQ   89 (246)
T ss_pred             EEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCEEECCEE-EEEECCCCCCCHHHHHHCCCCHHHHHCCCCHHHHHH
T ss_conf             7999985789999765677789879999999999999822147-888897996998899773928999835975899999


Q ss_pred             HHHHHHCCCCCHHHHCCCCHHHHHHH----HCCCCC------CCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             44442022210011003212378898----618866------64210023455431687667724667762244422335
Q gi|254780277|r  452 YLKKFFENEHFLKIGHNIKYDKLVLH----RYGISM------RGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEIL  521 (976)
Q Consensus       452 ~L~~lle~~~i~kIgHN~KfD~~~L~----~~GI~l------~~i~DTmlaayLLdp~~~~~~L~~la~~yL~~~~~e~~  521 (976)
T Consensus        90 efl~FI~d~~L--VaHNa~FD~~FLn~El~r~~~~~~~~~~~~~viDTL~lAR~~~Pg~-~~sLdaLc~r~~-Id~----  161 (246)
T PRK08858         90 EFLEFIKGAEL--VAHNAPFDVGFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGK-RNNLDVLCERYG-IDN----  161 (246)
T ss_pred             HHHHHHCCCEE--EEECCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEHHHHHHHHCCCC-CCCHHHHHHHCC-CCC----
T ss_conf             99999589989--9972288899999999982877675134201002999999868999-888899999819-898----


Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             654322210000001233332221111124567763
Q gi|254780277|r  522 KSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLR  557 (976)
Q Consensus       522 ~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l~  557 (976)
T Consensus       162 -s------------~R~~HgALlDa~lLa~Vyl~mt  184 (246)
T PRK08858        162 -S------------HRTLHGALLDAEILADVYLLMT  184 (246)
T ss_pred             -C------------CCCCCCHHHHHHHHHHHHHHHC
T ss_conf             -8------------8340230888999999999972