HHsearch alignment for GI: 254780277 and conserved domain: cd06148

>cd06148 Egl_like_exo The Egalitarian (Egl) protein subfamily is composed of Drosophila Egl and similar proteins. Egl is a component of an mRNA-binding complex which is required for oocyte specification. Egl contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. The motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The conservation of this subfamily throughout eukaryotes suggests that its members may be part of ancient RNA processing complexes that are likely to participate in the regulated processing of specific mRNAs.
Probab=99.60  E-value=4.7e-15  Score=128.41  Aligned_cols=175  Identities=16%  Similarity=0.169  Sum_probs=127.5

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             99999986685232332224331100124420102577665443455023137443334565001788999974444202
Q gi|254780277|r  379 QWVQKLETIGSASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFIDLSVHTSQDSTGKNTLTKEILSYLKKFFE  458 (976)
Q Consensus       379 ~li~~L~~~~~ia~DtETt~ld~~~~~ivGisls~~~~~~~~~~~~~~~yip~~~~~~~d~~~~~~~~~evl~~L~~lle  458 (976)
T Consensus         2 ~ai~~L~~~~vi~iD~E~~~~~~~-g~l~LiQiat~~~~--------vyl~D~~~~~----------~~~~~~~Lk~iLe   62 (197)
T cd06148           2 EAIIHLKKQKVIGLDCEGVNLGRK-GKLCLVQIATRTGQ--------IYLFDILKLG----------SIVFINGLKDILE   62 (197)
T ss_pred             HHHHHHHHCCEEEEECCCCCCCCC-CCEEEEEEEECCCC--------EEEEECCCCC----------CHHHHHHHHHHHC
T ss_conf             589998759999998886788989-98879999648998--------8999616676----------3445689999956


Q ss_pred             CCCCHHHHCCCCHHHHHHHH-CCCCCCCCCCHHHHHHHHCCCC-------CCCCHHHHHHHHCCCCCCCCCCCC----CC
Q ss_conf             22100110032123788986-1886664210023455431687-------667724667762244422335654----32
Q gi|254780277|r  459 NEHFLKIGHNIKYDKLVLHR-YGISMRGFEDIMLMSYVLDSGR-------SSHDIASIAQKWLSYTRKEILKSR----KS  526 (976)
Q Consensus       459 ~~~i~kIgHN~KfD~~~L~~-~GI~l~~i~DTmlaayLLdp~~-------~~~~L~~la~~yL~~~~~e~~~~~----k~  526 (976)
T Consensus        63 ~~~I~KV~H~~r~D~~~L~~~~gi~~~nvfDTqiA~~ll~~~~~~~~~~~~~~sl~~l~~~~l~~~~~~~~~~~~~~~~~  142 (197)
T cd06148          63 SKKILKVIHDCRRDSDALYHQYGIKLNNVFDTQVADALLQEQETGGFNPDRVISLVQLLDKYLYISISLKEDVKKLMRED  142 (197)
T ss_pred             CCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf             99823999610999999999709970670319999999753131476775641599999999576401778778887506


Q ss_pred             CCCCHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             22100000-01233332221111124567763222100013457886
Q gi|254780277|r  527 SIPIDKIS-DSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERL  572 (976)
Q Consensus       527 ~~~~~~i~-~e~~~~Yaa~Da~~t~~L~~~l~~~L~~~~l~~l~~~i  572 (976)
T Consensus       143 ~s~W~~RPLt~~ql~YAa~DV~yL~~L~~~L~~~Li~~~~~~~~~~~  189 (197)
T cd06148         143 PKFWALRPLTEDMIRYAALDVLCLLPLYYAMLDALISKFLKAVFKYL  189 (197)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             55446799999999999998999999999999999999999999998