HHsearch alignment for GI: 254780277 and conserved domain: pfam00929
>pfam00929 Exonuc_X-T Exonuclease. This family includes a variety of exonuclease proteins, such as ribonuclease T and the epsilon subunit of DNA polymerase III.;
Probab=98.45 E-value=3.9e-07 Score=70.63 Aligned_cols=144 Identities=14% Similarity=0.176 Sum_probs=89.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEC-C---CC------CCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 52323322243311001244201025776654434550231-3---74------43334565001788999974444202
Q gi|254780277|r 389 SASFKIITDTMDAFHSKPIAIAISTLDQKDDTSFKVETIFI-D---LS------VHTSQDSTGKNTLTKEILSYLKKFFE 458 (976)
Q Consensus 389 ~ia~DtETt~ld~~~~~ivGisls~~~~~~~~~~~~~~~yi-p---~~------~~~~~d~~~~~~~~~evl~~L~~lle 458 (976)
T Consensus 1 ~v~~D~ETTGl~~~~~~Iieigav~~~~~~~~~~~-~~~~v~P~~~i~~~~~~i~GIt~~~l~~~~~~~~~~~~~~~~l~ 79 (162)
T pfam00929 1 LVVIDCETTGLDPEKDRIIEIAAVSIVGGENIGPV-FDTYVKPERLITDEATKFHGITPEMLRNAPSFEEVLEAFLEFLK 79 (162)
T ss_pred CEEEEEECCCCCCCCCEEEEEEEEEEECCEEEEEE-EEEEECCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 98999868999899975899999999999776555-67877788888999998739787775415311779999999842
Q ss_pred CCCCHHHHCCCCHHHHHHHH----CCCCC----CCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 22100110032123788986----18866----64210023455431687667724667762244422335654322210
Q gi|254780277|r 459 NEHFLKIGHNIKYDKLVLHR----YGISM----RGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYTRKEILKSRKSSIPI 530 (976)
Q Consensus 459 ~~~i~kIgHN~KfD~~~L~~----~GI~l----~~i~DTmlaayLLdp~~~~~~L~~la~~yL~~~~~e~~~~~k~~~~~ 530 (976)
T Consensus 80 ~~~~-~v~~n~~fD~~~l~~~~~~~~~~~~~~~~~~~dt~~~~~~~~~~~~~~~L~~l~~~~~i~~~------------- 145 (162)
T pfam00929 80 KLKI-LVGHNASFDVGFLLYDDLRFLKLPHPKLNDVIDTLILDKATYKGFKRRSLDALAEKLGLEKI------------- 145 (162)
T ss_pred CCCE-EECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC-------------
T ss_conf 5857-77788778999999999985863366333304489999997504467998999988599998-------------
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 00000123333222111112456
Q gi|254780277|r 531 DKISDSQVQEHAIENSNVILQLW 553 (976)
Q Consensus 531 ~~i~~e~~~~Yaa~Da~~t~~L~ 553 (976)
T Consensus 146 ------~~aH~Al~Da~~t~~lf 162 (162)
T pfam00929 146 ------QRAHRALDDARATAELF 162 (162)
T ss_pred ------CCCCCHHHHHHHHHHHC
T ss_conf ------88678299999999879