HHsearch alignment for GI: 254780277 and conserved domain: pfam10108
>pfam10108 Exon_PolB Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. This domain is found in various prokaryotic 3'-5' exonucleases and hypothetical proteins.
Probab=94.57 E-value=0.097 Score=31.27 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHCCCCCHHHHCCC-CHHHHHHH----HCCCCCCCCCCHH-------------------HHHHHHCC-C
Q ss_conf 8899997444420222100110032-12378898----6188666421002-------------------34554316-8
Q gi|254780277|r 445 LTKEILSYLKKFFENEHFLKIGHNI-KYDKLVLH----RYGISMRGFEDIM-------------------LMSYVLDS-G 499 (976)
Q Consensus 445 ~~~evl~~L~~lle~~~i~kIgHN~-KfD~~~L~----~~GI~l~~i~DTm-------------------laayLLdp-~ 499 (976)
T Consensus 36 ~E~~ll~~F~~~i~~~~P~LVs~NG~gFDlPvL~~RAl~~gi~ap~~~~~~~~~~kw~nY~~Ry~~~H~DLmd~l~~~g~ 115 (211)
T pfam10108 36 SEKELIQRFFDGIEKYTPQLVSFNGRGFDLPVLHYRALKHGVSAPRYFDTGDRDFKWNNYFNRYSTRHLDLMDLLSGYGA 115 (211)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 99999999999998439828865686554899999999818885078756787665444112356544548999873288
Q ss_pred CCCCCHHHHHHHHCCCCC-CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 766772466776224442-233565432221000000123333222111112456776
Q gi|254780277|r 500 RSSHDIASIAQKWLSYTR-KEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLL 556 (976)
Q Consensus 500 ~~~~~L~~la~~yL~~~~-~e~~~~~k~~~~~~~i~~e~~~~Yaa~Da~~t~~L~~~l 556 (976)
T Consensus 116 ~~~~~Ld~~a~l-~G~PGK~~~~G~~V~~~-~~~G~l~~I~~YCe~DvlnTylv~LR~ 171 (211)
T pfam10108 116 RANAPLDEVAAL-LGLPGKMGVDGSQVWEL-YQAGKIEEIRDYCETDVLNTYLVYLRF 171 (211)
T ss_pred CCCCCHHHHHHH-CCCCCCCCCCHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 677898999998-19998787764589999-985988899999887689999999999