BLAST/PSIBLAST alignment of GI: 254780277 and GI: 159184162 at iteration 1
>gi|159184162|ref|NP_353146.2| DNA polymerase I [Agrobacterium tumefaciens str. C58] Length = 998
>gi|159139496|gb|AAK85931.2| DNA polymerase I [Agrobacterium tumefaciens str. C58] Length = 998
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/999 (50%), Positives = 681/999 (68%), Gaps = 28/999 (2%)
Query: 1 MQKENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIA-- 58
M+K +HLFLVDGS FI+RAF+A P L+RK DGLPVNA++GFCNMLWKLL+++R +
Sbjct: 1 MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT 60
Query: 59 -SHFAVIFDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEA 117
+HFAVIFDY + TFRNE+Y YKANR PE L+PQ L+R AT+AF +P IE +GFEA
Sbjct: 61 PTHFAVIFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEA 120
Query: 118 DDIIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEKIDIEHVIKKWGIPPE 177
DDIIATY AE G VTIIS+DKDLMQLV+ +YD +K+++I + VI+KWG+ PE
Sbjct: 121 DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVIEKWGVGPE 180
Query: 178 KMVCLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYA 237
KM+ LQA+TGDS DN+PGIPGIG KTAA LL+EYG+L+ +L A IKQ+KRRENI+ A
Sbjct: 181 KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA 240
Query: 238 ETARLSRKLVMLRTDVPITIPLEHLILEDCNGPRLISFLKALEFTKLINRVATTYDCDAA 297
E ARLSR+LV LRTDVP+ LE L+LE NGP+LI+FLKA+EFT L RVA D DA+
Sbjct: 241 ELARLSRQLVALRTDVPLEQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAEATDSDAS 300
Query: 298 NIEPVVL------DINTTENKGIAIETEIDRDTTIKTSQFSSLSDQTSKINSEQTPQKLF 351
I+P + D + + A D S+++ I TP L
Sbjct: 301 AIDPANVPVQWGADAHGPDLDAPAAAMAGDVSAEGNNRPASAVAPAKRMIGEGSTPADLT 360
Query: 352 LERLQKLSQYPINNDSYTKIVNTKDIQQWVQKLETIGSASFKIITDTMDAFHSKPIAIAI 411
R + I+ +YT I + + W+ G +F T ++D ++ + ++
Sbjct: 361 TARQALFAATKIDTTAYTAIRDIATLDLWIAAAREAGVVAFDTETTSLDPMQAELVGFSL 420
Query: 412 STLDQ-KDDTSFKVETIFIDLSVHTSQDSTGKNTLT------------KEILSYLKKFFE 458
+ D KD + + ++ L T + +G + + E L LK E
Sbjct: 421 AIADNGKDASGTDIRAAYVPL---THKTGSGGDLFSDGIKLAEGQAPFAEALERLKDLLE 477
Query: 459 NEHFLKIGHNIKYDKLVLHRYGISMRGFEDIMLMSYVLDSGRSSHDIASIAQKWLSYT-- 516
+E LK+ N+KYD L++ R+G+ MR F+D ML+SYVL++G+++H + +++++WL +T
Sbjct: 478 DEAVLKVAQNLKYDYLLMKRHGVVMRSFDDTMLISYVLEAGKTTHGMDTLSERWLGHTPI 537
Query: 517 -RKEILKSRKSSIPIDKISDSQVQEHAIENSNVILQLWLLLRPKLIVEKLLHVYERLDKP 575
K++ S KSSI D ++ + +A E+++V L+LW+ L+P+L+ E+L VYERL++P
Sbjct: 538 AYKDVTGSGKSSITFDFVNIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERP 597
Query: 576 MIDVVSQMEITGIQIDQDLLKQVSAEISKNLLSLEENIYDLSGEKFNLSSPKQLGDILFT 635
++ V++ ME GI +D+ +L ++S E+++ S EE IY+L+GE+FN+ SPKQLGDILF
Sbjct: 598 LVPVLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNIGSPKQLGDILFG 657
Query: 636 KLKFPSGAKTKTGQWKTTAQDLEQINCGDNPIIKNILEWRQLSKIKSTYADSLPNHINKR 695
++ P G+KTKTGQW T+AQ LE + + + I++WRQL+K+KSTY D+LP++I+
Sbjct: 658 RMGLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPSYIHPE 717
Query: 696 TQRVHTFYSLASTMTGRLASLEPNLQNIPIKTDLGQKIRRAFISPPTKKLISADYSQIEL 755
T+RVHT Y+LAST TGRL+S EPNLQNIP++T G+KIR AFIS P KL+SADYSQIEL
Sbjct: 718 TKRVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIEL 777
Query: 756 RILAHIAKITPLYQVFENSLDIHRMVAAEIFGVNIEKVSPQMRRHAKTINFSIIYGISPF 815
R+LAH+A I L FEN +DIH M A+E+FGV +E + ++RR AK INF IIYGIS F
Sbjct: 778 RVLAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAF 837
Query: 816 RLATQLRIPRSEAADYIKRYFHRFPGIHEYIEKTKNFVRQNGYVETIFGRRIHYDEINSP 875
LA QL I RSEA DYIK+YF RFPGI +Y+E TK F R+NGYVETIFGRR HY EI S
Sbjct: 838 GLANQLSIARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSS 897
Query: 876 KSSIRNINERAAINAPIQGSAADITRRAMISVHKSLEDHKLATKMLLQIHDELVFEVPEE 935
S++ NERAAINAPIQGSAADI RRAMI + +LE KL+ +MLLQ+HDEL+FEV E
Sbjct: 898 NPSVKAFNERAAINAPIQGSAADIIRRAMIRIEPALEAEKLSARMLLQVHDELIFEVEEA 957
Query: 936 EITTASQIIVHSMEKACLPKINLRVPLKVNIKVSNNWQE 974
EI ++V ME A +P I++RVPLKV+ + ++NW E
Sbjct: 958 EIEKTLPVVVSVMEDAAMPAISMRVPLKVDARAADNWDE 996