RPSBLAST alignment for GI: 254780277 and conserved domain: smart00475

>gnl|CDD|128751 smart00475, 53EXOc, 5'-3' exonuclease. Length = 259
 Score =  315 bits (809), Expect = 4e-86
 Identities = 133/262 (50%), Positives = 178/262 (67%), Gaps = 10/262 (3%)

Query: 5   NHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASHFAVI 64
             L LVDGSS  +RA++A P L +   G P NA+ GF  ML KL+    KE   ++ AV+
Sbjct: 1   KKLLLVDGSSLAFRAYFALPPL-KNSKGEPTNAVYGFLRMLLKLI----KEEKPTYVAVV 55

Query: 65  FDYPAVTFRNEIYPDYKANRPKIPEMLLPQLPLVRLATQAFGIPAIEIQGFEADDIIATY 124
           FD    TFR+E+YP+YKANRPK P+ LL Q+PL++    A GIP +E++G+EADD+IAT 
Sbjct: 56  FDAKGKTFRHELYPEYKANRPKTPDELLEQIPLIKELLDALGIPVLEVEGYEADDVIATL 115

Query: 125 TYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVKEEK----IDIEHVIKKWGIPPEKMV 180
              AE EG+ V I+S DKDL+QLVS    + D  K  K       E+VI+K+G+ PE+++
Sbjct: 116 AKKAEAEGYEVRIVSGDKDLLQLVSDKVSVLDPTKGIKEFELYTPENVIEKYGLTPEQII 175

Query: 181 CLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILEYAETA 240
             +AL GDS DNIPG+PGIG KTAA LL+E+G+LENIL N  ++K KK RE +L + E A
Sbjct: 176 DYKALMGDSSDNIPGVPGIGEKTAAKLLKEFGSLENILENLDKLK-KKLREKLLAHKEDA 234

Query: 241 RLSRKLVMLRTDVPITIPLEHL 262
           +LSRKL  + TDVP+ + LE L
Sbjct: 235 KLSRKLATIETDVPLEVDLEDL 256