RPSBLAST alignment for GI: 254780277 and conserved domain: COG0258
>gnl|CDD|30607 COG0258, Exo, 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair]. Length = 310
Score = 242 bits (619), Expect = 3e-64
Identities = 126/299 (42%), Positives = 179/299 (59%), Gaps = 13/299 (4%)
Query: 1 MQKENHLFLVDGSSFIYRAFYATPLLSRKHDGLPVNAIAGFCNMLWKLLQNSRKESIASH 60
M K L L+DGSS +YRA +A P G P A++GF ML++L++ +H
Sbjct: 7 MNKSGKLLLIDGSSLLYRALHALPQPLGNPLGDPTGAVSGFLGMLYRLIRLLE----PTH 62
Query: 61 FAVIFDYPAVTFRNEIYPDYKANRPKI-PEMLLPQLPLVRLATQAFGIPAIEIQGFEADD 119
V+FD TFR+E+ +YKANR K P+ L PQ+P++ A GIP +E+ G EADD
Sbjct: 63 PVVVFDGKPPTFRHELLEEYKANREKEMPDELAPQIPILTELLVALGIPLLELMGIEADD 122
Query: 120 IIATYTYIAEKEGFAVTIISTDKDLMQLVSPTTCLYDTVK---EEKIDIEHVIKKW-GIP 175
I T A K+G V IIS DKDL+QLVSP + + K E+ +D+E V +K+ G+
Sbjct: 123 PIETLAQKAYKKGDVVLIISGDKDLLQLVSPNVLVINGKKGEPEKFLDLEEVEEKFKGLT 182
Query: 176 PEKMVCLQALTGDSIDNIPGIPGIGYKTAALLLQEYGNLENILINASRIKQKKRRENILE 235
PE+++ L+AL GDS DNIPG+ GIG KTA LLQEYG+LE + N IK KK RE +LE
Sbjct: 183 PEQLIDLKALVGDSSDNIPGVKGIGPKTALKLLQEYGSLEGLYENLDIIK-KKTREKLLE 241
Query: 236 YAETARLSRKLVMLRTDVPITIPLEHLI---LEDCNGPRLISFLKALEFTKLINRVATT 291
E A LS+ L ++TDVP+ LE ++ + + + +L+ L F +L+ + +
Sbjct: 242 DKEKAFLSKPLATIKTDVPLEFDLEDILELLVPEHDFSKLLEERVELGFKRLLKAIGSV 300