HHsearch alignment for GI: 254780279 and conserved domain: COG0287
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism].
Probab=96.51 E-value=0.037 Score=34.95 Aligned_cols=106 Identities=17% Similarity=0.117 Sum_probs=60.5
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCC--CCCH-HHHHCCCCEEEEEEC
Q ss_conf 8737999899877999999998389978999996489802045536660875467545--5685-785213550476310
Q gi|254780279|r 4 SPMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKF--SDNL-AMAIQSVDGIIDFSS 80 (280)
Q Consensus 4 ~~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i--~~dl-~~~~~~~DViIDFT~ 80 (280)
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~---~a~-----~lgv~d~~~~~~~~~~~~~aDlVivavP 73 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLK---AAL-----ELGVIDELTVAGLAEAAAEADLVIVAVP 73 (279)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH---HHH-----HCCCCHHHCCCHHHHHCCCCCEEEEECC
T ss_conf 86489998774677999999997698479972477467787---766-----3585301001155541356998999577
Q ss_pred CCHHHHHHHHHHH-CCCE-EEEEECCCCHHHHHHHHHHH
Q ss_conf 1024788876432-3721-57650222313589998740
Q gi|254780279|r 81 PALTLQSLNISAQ-HNIV-HIIGTTGFSVKENEVISSFA 117 (280)
Q Consensus 81 P~~~~~~~~~a~~-~g~~-vViGTTG~~~e~~~~l~~~s 117 (280)
T Consensus 74 i~~~~~~l~~l~~~l~~g~iv~Dv~S~K~~v~~a~~~~~ 112 (279)
T COG0287 74 IEATEEVLKELAPHLKKGAIVTDVGSVKSSVVEAMEKYL 112 (279)
T ss_pred HHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHC
T ss_conf 889999999863037999889736420178999999746