HHsearch alignment for GI: 254780279 and conserved domain: KOG1014

Probab=90.85  E-value=0.49  Score=27.24  Aligned_cols=94  Identities=18%  Similarity=0.251  Sum_probs=58.8

Q ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHC-CCC-EEEEEECCCHH
Q ss_conf             999899-877999999998389978999996489802045536660875467545568578521-355-04763101024
Q gi|254780279|r    8 ISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQ-SVD-GIIDFSSPALT   84 (280)
Q Consensus         8 V~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~-~~D-ViIDFT~P~~~   84 (280)
T Consensus        52 AVVTGaTDGIGKayA~eLAk-rG~n-vvLIsRt~~KL~~---------------v~kEI~~~~~vev~~i~~Dft~~~~~  114 (312)
T KOG1014          52 AVVTGATDGIGKAYARELAK-RGFN-VVLISRTQEKLEA---------------VAKEIEEKYKVEVRIIAIDFTKGDEV  114 (312)
T ss_pred             EEEECCCCCCHHHHHHHHHH-CCCE-EEEEECCHHHHHH---------------HHHHHHHHHCCEEEEEEEECCCCCHH
T ss_conf             99977888522999999997-5987-9999688899999---------------99999887580799999864898156


Q ss_pred             HHHHHH-HHHCCCEEEEEECCCCHHHHHHHHHHHC
Q ss_conf             788876-4323721576502223135899987403
Q gi|254780279|r   85 LQSLNI-SAQHNIVHIIGTTGFSVKENEVISSFAR  118 (280)
Q Consensus        85 ~~~~~~-a~~~g~~vViGTTG~~~e~~~~l~~~s~  118 (280)
T Consensus       115 ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~  149 (312)
T KOG1014         115 YEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPE  149 (312)
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCH
T ss_conf             89999886278648999655316788377873855