HHsearch alignment for GI: 254780279 and conserved domain: PRK01710

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.69  E-value=0.071  Score=32.97  Aligned_cols=122  Identities=16%  Similarity=0.235  Sum_probs=62.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCC--CCHHHHHCCCCEEEEEECCCHH
Q ss_conf             79998998779999999983899789999964898020455366608754675455--6857852135504763101024
Q gi|254780279|r    7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFS--DNLAMAIQSVDGIIDFSSPALT   84 (280)
Q Consensus         7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~--~dl~~~~~~~DViIDFT~P~~~   84 (280)
T Consensus        16 kv~i~GlG~sG~a~a~~L~~-~g~~v~-~~D~~~~~~~~~~~~~l---~~~gi~~~~g~~~~~~~~~~d~vv--~SPgI~   88 (458)
T PRK01710         16 KVAVVGIGVSNIPLIKFLVK-LGAKVT-AFDKKSEEELGEISLEL---KEKGVNLELGENYLDKLTGFDVIF--KTPSMR   88 (458)
T ss_pred             EEEEEEECHHHHHHHHHHHH-CCCEEE-EEECCCCHHHHHHHHHH---HHCCCEEEECCCHHHHCCCCCEEE--ECCCCC
T ss_conf             69999787889999999997-889799-99898843148999999---857998995784054237888899--899879


Q ss_pred             --HHHHHHHHHCCCEEE--------------EEECCCCHH--HHHHHHHHHC--CCCCEECCCHHHHHHHHHH
Q ss_conf             --788876432372157--------------650222313--5899987403--5552100001156899999
Q gi|254780279|r   85 --LQSLNISAQHNIVHI--------------IGTTGFSVK--ENEVISSFAR--NAPIVKSSNMSLGINFLGF  137 (280)
Q Consensus        85 --~~~~~~a~~~g~~vV--------------iGTTG~~~e--~~~~l~~~s~--~~~il~apN~SiGv~ll~~  137 (280)
T Consensus        89 ~~~p~~~~a~~~gi~v~~e~el~~~~~~~~~IaVTGTnGKTTTtsmi~~iL~~~g~~~~~gGN--iG~p~~~~  159 (458)
T PRK01710         89 IDSPELVKAKEEGAYITSEMEEFIKYCPAKVFGITGSDGKTTTTTLIYEMLKEEGYKTWVGGN--IGTPLFSN  159 (458)
T ss_pred             CCCHHHHHHHHCCCCEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCHHHHH
T ss_conf             989999999987993740999998637587799936898478999999999984997585166--26446888