HHsearch alignment for GI: 254780279 and conserved domain: PRK08125

Probab=94.94  E-value=0.069  Score=33.05  Aligned_cols=98  Identities=16%  Similarity=0.330  Sum_probs=62.3

Q ss_pred             CEEEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCC-----CCCCCCC-HHHHHCCCCEEEE
Q ss_conf             737999899-87799999999838997899999648980204553666087546-----7545568-5785213550476
Q gi|254780279|r    5 PMRISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPM-----GIKFSDN-LAMAIQSVDGIID   77 (280)
Q Consensus         5 ~IkV~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~-----~v~i~~d-l~~~~~~~DViID   77 (280)
T Consensus       315 ~~~vlilgvngfig~hl~~~~l~~~~~~v~g~-d~~~~~-----i~~~~~~p~~~f~~gdi~~~~~wie~~ikkcdvvlp  388 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGL-DIGSDA-----ISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLP  388 (660)
T ss_pred             CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEE-ECCCCH-----HHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEEE
T ss_conf             22799983441367899999850388589988-657534-----557534995488815614668999988754576732


Q ss_pred             E---------E-CCC--------HHHHHHHHHHHCCCEEEEEEC----CCCHH
Q ss_conf             3---------1-010--------247888764323721576502----22313
Q gi|254780279|r   78 F---------S-SPA--------LTLQSLNISAQHNIVHIIGTT----GFSVK  108 (280)
Q Consensus        78 F---------T-~P~--------~~~~~~~~a~~~g~~vViGTT----G~~~e  108 (280)
T Consensus       389 lvaiatp~~y~~~pl~vfeldfe~nl~ivr~c~ky~kriifpstsevygm~~d  441 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPSTSEVYGMCTD  441 (660)
T ss_pred             EHHHCCHHHHHCCCCEEEEECHHHCCHHHHHHHHHCCEEEECCHHHHCCCCCC
T ss_conf             05534747763486047873267552899999974877896560551014788