HHsearch alignment for GI: 254780279 and conserved domain: PRK09496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=91.59 E-value=0.11 Score=31.56 Aligned_cols=123 Identities=16% Similarity=0.209 Sum_probs=62.3
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCC-CCC-CCCCCC-CCH-HHHHCCCCEEEEEECC
Q ss_conf 379998998779999999983899789999964898020455366608-754-675455-685-7852135504763101
Q gi|254780279|r 6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVG-ISP-MGIKFS-DNL-AMAIQSVDGIIDFSSP 81 (280)
Q Consensus 6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~-~~~-~~v~i~-~dl-~~~~~~~DViIDFT~P 81 (280)
T Consensus 233 ~~v~I~Ggg~ig~~la~~L~--~~~~v-~iIe~d~~~~--~~la~~l~~~~Vi~GD~td~~~L~e~gi~~aD~~ia~T~~ 307 (455)
T PRK09496 233 KRIMIAGGGNIGLYLAKLLE--KGYSV-KLIERDPERA--EELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (455)
T ss_pred CEEEEECCCHHHHHHHHHHH--CCCEE-EEECCCHHHH--HHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 51899878699999999874--08838-9970898999--9999747853999788768899976364556489990388
Q ss_pred CHH-HHHHHHHHHCCCEEEEEECCCCH-HHHHHHHHHHCCCCCEECCCHHHHHHHHHH
Q ss_conf 024-78887643237215765022231-358999874035552100001156899999
Q gi|254780279|r 82 ALT-LQSLNISAQHNIVHIIGTTGFSV-KENEVISSFARNAPIVKSSNMSLGINFLGF 137 (280)
Q Consensus 82 ~~~-~~~~~~a~~~g~~vViGTTG~~~-e~~~~l~~~s~~~~il~apN~SiGv~ll~~ 137 (280)
T Consensus 308 De~Ni~~~llAk~~g~~~~ia~--v~~~~y~~l~~~l--gid~~isp~~~~a~~I~~~ 361 (455)
T PRK09496 308 DEANILSSLLAKRLGAKKVIAL--INRSAYVDLVQGL--GIDIAISPRQATISAILRH 361 (455)
T ss_pred HHHHHHHHHHHHHCCCCCEEEE--ECCHHHHHHHHHC--CCCEEECHHHHHHHHHHHH
T ss_conf 1889999999987399736888--4466788765324--8865788899999999998