HHsearch alignment for GI: 254780279 and conserved domain: PRK09880

Probab=96.53  E-value=0.029  Score=35.60  Aligned_cols=117  Identities=14%  Similarity=0.176  Sum_probs=68.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHC---CCCEEEEEE-CCC
Q ss_conf             7999899877999999998389978999996489802045536660875467545568578521---355047631-010
Q gi|254780279|r    7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQ---SVDGIIDFS-SPA   82 (280)
Q Consensus         7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~---~~DViIDFT-~P~   82 (280)
T Consensus       172 ~VlV~G~G~iGl~~~~~ak~~-Ga~~Vi~~d~~~~rl---~~a~~~Ga~~~i~~~~~~~~~~~~~~g~~Dvvie~~G~~~  247 (343)
T PRK09880        172 RVFISGVGPIGCLIVSAVKTL-GAAEIVCADLSPRSL---SLARQMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPS  247 (343)
T ss_pred             EEEEECCCHHHHHHHHHHHHC-CCCEEEEEECCHHHH---HHHHHCCCCEEECCCCCCHHHHHHHCCCCCEEEEECCCHH
T ss_conf             899984776799999999986-998799997978999---9999729979987987439999963699778999219999


Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCCH
Q ss_conf             2478887643237215765022231358999874035552100001
Q gi|254780279|r   83 LTLQSLNISAQHNIVHIIGTTGFSVKENEVISSFARNAPIVKSSNM  128 (280)
Q Consensus        83 ~~~~~~~~a~~~g~~vViGTTG~~~e~~~~l~~~s~~~~il~apN~  128 (280)
T Consensus       248 ~~~~al~~~r~gG~iv~vG~~~~~-~~~~~~~l~~kei~i~Gs~~~  292 (343)
T PRK09880        248 SVNTCLEVTRAKGVMVQVGMGGAM-PEFPMMTLISKEISLKGSFRF  292 (343)
T ss_pred             HHHHHHHHCCCCEEEEEEECCCCC-CCCCHHHHHHCCCEEEEECCC
T ss_conf             999999737798399999727988-870899998588499990486