HHsearch alignment for GI: 254780279 and conserved domain: PRK11559
>PRK11559 garR tartronate semialdehyde reductase; Provisional.
Probab=97.83 E-value=0.00013 Score=51.67 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=85.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEE-ECCCH
Q ss_conf 73799989987799999999838997899999648980204553666087546754556857852135504763-10102
Q gi|254780279|r 5 PMRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDF-SSPAL 83 (280)
Q Consensus 5 ~IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDF-T~P~~ 83 (280)
T Consensus 1 ~MkIgfIGlG~MG~~ma~~L~~-~G~~v~-v~dr~~~~~~-----~l---~~~Ga~~~~s~~e~~~~~dvvi~~l~~~~~ 70 (295)
T PRK11559 1 TMKVGFIGLGIMGKPMSKNLLK-AGYSLV-VYDRNPEAIA-----DV---IAAGAETASTAKAIAEQCDVIITMLPNSPH 70 (295)
T ss_pred CCEEEEECCHHHHHHHHHHHHH-CCCEEE-EEECCHHHHH-----HH---HHCCCCCCCCHHHHHHCCCEEEEECCCCCC
T ss_conf 9789998405769999999997-899589-9929999999-----99---985992039999998438878996689810
Q ss_pred HHHHHH------HHHHCCCEEEEEECCCCHHHHHHHHHHHCC--CCCEECCCHHHHHH--------HH----HHHHHHHH
Q ss_conf 478887------643237215765022231358999874035--55210000115689--------99----99999999
Q gi|254780279|r 84 TLQSLN------ISAQHNIVHIIGTTGFSVKENEVISSFARN--APIVKSSNMSLGIN--------FL----GFLVETAA 143 (280)
Q Consensus 84 ~~~~~~------~a~~~g~~vViGTTG~~~e~~~~l~~~s~~--~~il~apN~SiGv~--------ll----~~l~~~~a 143 (280)
T Consensus 71 v~~v~~g~~gi~~~~~~g~iiid~sT~~-p~~~~~~a~~~~~~g~~~lDaP-VsGg~~~A~~G~L~~mvgG~~~~~~~~~ 148 (295)
T PRK11559 71 VKEVALGENGIIEGAKPGTVLIDMSSIA-PLASREISEALKAKGIEMLDAP-VSGGEPKAIDGTLSVMVGGDKAIFDKYY 148 (295)
T ss_pred HHHHHHCCCCCHHCCCCCCEEEECCCCC-HHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHCCCEEEECCCHHHHHHHH
T ss_conf 7766307766011389998899899999-9999999999996598389424-7688688984881499679889999999
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 861156660089999864167899867899999999
Q gi|254780279|r 144 EYLLPAKDWDFEILEMHHRRKLDSPSGTALLLGEAI 179 (280)
Q Consensus 144 ~~l~~~~~~dieI~E~HH~~K~DaPSGTA~~la~~i 179 (280)
T Consensus 149 piL~~~~~------~i~~~G--~~G~g~~~Kl~nN~ 176 (295)
T PRK11559 149 DLMKAMAG------SVVHTG--EIGAGNVTKLANQV 176 (295)
T ss_pred HHHHCCCC------CEEECC--CCCHHHHHHHHHHH
T ss_conf 99942655------603428--94589999999999