HHsearch alignment for GI: 254780279 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=94.74 E-value=0.18 Score=30.18 Aligned_cols=160 Identities=16% Similarity=0.146 Sum_probs=72.7
Q ss_pred CE-EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHH------CCCHHHHCCC---C-------CCCCCCCCCHHH
Q ss_conf 73-79998998779999999983899789999964898020------4553666087---5-------467545568578
Q gi|254780279|r 5 PM-RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLI------GQDVGNFVGI---S-------PMGIKFSDNLAM 67 (280)
Q Consensus 5 ~I-kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~------g~d~~~~~~~---~-------~~~v~i~~dl~~ 67 (280)
T Consensus 312 ~i~~v~ViGaG~MG~GIA~~~a~-aG~~V~-l~D~~~e~l~~g~~~~~~~~~~~v~~g~~~~~~~~~~l~ri~~~~~~~- 388 (715)
T PRK11730 312 DVKQAAVLGAGIMGGGIAYQSAS-KGVPVI-MKDINQKALDLGMNEAAKLLNKQVERGRIDGLKMAGVLSTITPTLDYA- 388 (715)
T ss_pred CCCEEEEECCCCCHHHHHHHHHH-CCCEEE-EEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCH-
T ss_conf 76279997877107999999995-799579-997899999999999999999998648998799999995687415402-
Q ss_pred HHCCCCEEEEEEC------------------CC-------HHHHHHHHHHHCCC----------------EE--EEEECC
Q ss_conf 5213550476310------------------10-------24788876432372----------------15--765022
Q gi|254780279|r 68 AIQSVDGIIDFSS------------------PA-------LTLQSLNISAQHNI----------------VH--IIGTTG 104 (280)
Q Consensus 68 ~~~~~DViIDFT~------------------P~-------~~~~~~~~a~~~g~----------------~v--ViGTTG 104 (280)
T Consensus 389 ~l~~~DlVIEAV~E~l~~K~~vf~~l~~~~~~~aIlAsNTSsl~i~~lA~~~~~Per~iG~HFfnP~~~m~LVEVv~g~~ 468 (715)
T PRK11730 389 GFKDVDVVVEAVVENPKVKAAVLAEVEQKVREDTILASNTSTISISLLAKALKRPENFCGMHFFNPVHRMPLVEVIRGEK 468 (715)
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCC
T ss_conf 43358889985436588999999999865587538851576577899997516821156522148844164488816899
Q ss_pred CCHHHHHHHHHHHC---CCCCEE--CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCH
Q ss_conf 23135899987403---555210--0001156899999999999861156660089999864167899867
Q gi|254780279|r 105 FSVKENEVISSFAR---NAPIVK--SSNMSLGINFLGFLVETAAEYLLPAKDWDFEILEMHHRRKLDSPSG 170 (280)
Q Consensus 105 ~~~e~~~~l~~~s~---~~~il~--apN~SiGv~ll~~l~~~~a~~l~~~~~~dieI~E~HH~~K~DaPSG 170 (280)
T Consensus 469 Ts~~t~~~~~~~~~~lgK~pVvv~d~pGFi-~NRil~~~~~ea~~l~~e--Ga~~~~ID~a~~~~~G~pmG 536 (715)
T PRK11730 469 TSDETIATVVAYASKMGKTPIVVNDCPGFF-VNRVLFPYFAGFSQLLRD--GADFRQIDKVMEKQFGWPMG 536 (715)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHCCCCCCC
T ss_conf 999999999999998198238982468605-878999999999999987--99999999999874799777