HHsearch alignment for GI: 254780279 and conserved domain: PRK13940

Probab=96.14  E-value=0.024  Score=36.27  Aligned_cols=87  Identities=13%  Similarity=0.170  Sum_probs=51.5

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEE-CCCHH
Q ss_conf             37999899877999999998389978999996489802045536660875467545568578521355047631-01024
Q gi|254780279|r    6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAIQSVDGIIDFS-SPALT   84 (280)
Q Consensus         6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~~~~DViIDFT-~P~~~   84 (280)
T Consensus       182 ~~vlvvGaGem~~l~~k~L~~~g-~~~i~v~nRt~~r--a~~la~~~~--~~~~~~~~~l~~~l~~aDivisaT~a~~~i  256 (414)
T PRK13940        182 KNVLIIGAGQTGELLFRHVTALA-PKQIMLANRTIEK--AQKITSAFR--NASAHYLSELPQLIKKADIIIAAVNVLEYI  256 (414)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCCHHH--HHHHHHHHC--CCCCCCHHHHHHHHHHCCEEEEECCCCHHH
T ss_conf             83899668647899999999769-9879994575677--999999708--885016999999986388799816982444


Q ss_pred             HHHHHHHHHCCCEEEE
Q ss_conf             7888764323721576
Q gi|254780279|r   85 LQSLNISAQHNIVHII  100 (280)
Q Consensus        85 ~~~~~~a~~~g~~vVi  100 (280)
T Consensus       257 i~~~~--~-~~~p~~~  269 (414)
T PRK13940        257 VTCKY--V-GDKPRVF  269 (414)
T ss_pred             CCHHH--H-CCCCEEE
T ss_conf             04866--4-5797589