>TIGR00715 precor6x_red precorrin-6x reductase; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y , .; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process.

Probab=96.64  E-value=0.015  Score=37.70  Aligned_cols=91  Identities=18%  Similarity=0.293  Sum_probs=70.3

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCC--CCCCCCC-HHHHHC--CCCEEEEEEC
Q ss_conf             3799989987799999999838997899999648980204553666087546--7545568-578521--3550476310
Q gi|254780279|r    6 MRISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPM--GIKFSDN-LAMAIQ--SVDGIIDFSS   80 (280)
Q Consensus         6 IkV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~--~v~i~~d-l~~~~~--~~DViIDFT~   80 (280)
T Consensus         1 ~~vll~GGT~dsr~~~~~L~~~~~~~i~~t~tt~----~~~~l~~~~~a~~v~~gaL~~~EGL~~~l~~~~i~~~vDAtH   76 (260)
T TIGR00715         1 MSVLLMGGTKDSRAIAKKLRALGDVEILVTVTTE----EGKKLLEISQASKVVTGALDKDEGLRELLKEESIDILVDATH   76 (260)
T ss_pred             CEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCC----CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEEEECCC
T ss_conf             9689971777899999740378758999874157----763001003777158757488875378886449638985797


Q ss_pred             CCHH---HHHHHHHHHCCCEEEE
Q ss_conf             1024---7888764323721576
Q gi|254780279|r   81 PALT---LQSLNISAQHNIVHII  100 (280)
Q Consensus        81 P~~~---~~~~~~a~~~g~~vVi  100 (280)
T Consensus        77 PFA~~~t~~a~~vc~E~~~~Yvr   99 (260)
T TIGR00715        77 PFAAQITKNALEVCKELGIPYVR   99 (260)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             35899999999999761981799