HHsearch alignment for GI: 254780279 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.32 E-value=0.035 Score=35.08 Aligned_cols=93 Identities=18% Similarity=0.182 Sum_probs=54.7
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCCCCCCCCCCCHHHHH----C--CCCEEEEEE-
Q ss_conf 799989987799999999838997899999648980204553666087546754556857852----1--355047631-
Q gi|254780279|r 7 RISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGISPMGIKFSDNLAMAI----Q--SVDGIIDFS- 79 (280)
Q Consensus 7 kV~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~~~~v~i~~dl~~~~----~--~~DViIDFT- 79 (280)
T Consensus 179 ~VlV~GaG~iGl~a~~~a-k~~Ga~~Vi~~d~~~~rl---~~A~~lGa~~~i~~~~~~~~~~v~~~t~g~G~Dvvie~~G 254 (358)
T TIGR03451 179 SVAVIGCGGVGDAAIAGA-ALAGASKIIAVDIDDRKL---EWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG 254 (358)
T ss_pred EEEEECCCHHHHHHHHHH-HHCCCCEEEEEECCHHHH---HHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCC
T ss_conf 899967376999999999-983991899991988999---9999659909973998788999999858988749999999
Q ss_pred CCCHHHHHHHHHHHCCCEEEEEEC
Q ss_conf 010247888764323721576502
Q gi|254780279|r 80 SPALTLQSLNISAQHNIVHIIGTT 103 (280)
Q Consensus 80 ~P~~~~~~~~~a~~~g~~vViGTT 103 (280)
T Consensus 255 ~~~~~~~al~~~~~gG~iv~~G~~ 278 (358)
T TIGR03451 255 RPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 989999999976279699999225