HHsearch alignment for GI: 254780279 and conserved domain: TIGR03466

>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.04  E-value=0.037  Score=34.91  Aligned_cols=93  Identities=15%  Similarity=0.267  Sum_probs=55.0

Q ss_pred             EEEEEECC-CHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCHHHHCCCC--CCCCCCCCCHHHHHCCCCEEEEEEC--
Q ss_conf             37999899-877999999998389978999996489802045536660875--4675455685785213550476310--
Q gi|254780279|r    6 MRISVLGG-GRMGQALIKEIHNNPSITLHSIIVRSGSPLIGQDVGNFVGIS--PMGIKFSDNLAMAIQSVDGIIDFSS--   80 (280)
Q Consensus         6 IkV~I~Ga-GkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g~d~~~~~~~~--~~~v~i~~dl~~~~~~~DViIDFT~--   80 (280)
T Consensus         1 MriLVTGgtGfiG~~l~~~L~~~-G~~V~~-l~r~~~~~~~--~~~-~~~~~~~gDl~d~~~~~~~~~~~d~ViH~Aa~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLER-GEEVRV-LVRPTSDRRN--LEG-LDVEIVEGDLRDPASLRKALAGCRALFHVAADY   75 (328)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-CCEEEE-EECCCCCHHH--HCC-CCCEEEEEECCCHHHHHHHHHCCCEEEEECCCC
T ss_conf             94999867779999999999978-498999-9899986556--521-797799820799999999971785897613423


Q ss_pred             ------C--------CHHHHHHHHHHHCCCE-EEEEEC
Q ss_conf             ------1--------0247888764323721-576502
Q gi|254780279|r   81 ------P--------ALTLQSLNISAQHNIV-HIIGTT  103 (280)
Q Consensus        81 ------P--------~~~~~~~~~a~~~g~~-vViGTT  103 (280)
T Consensus        76 ~~~~~~~~~~~~~Nv~gt~nll~aa~~~~v~r~V~~SS  113 (328)
T TIGR03466        76 RLWAPDPEEMYRANVEGTRNLLRAALEAGVERVVYTSS  113 (328)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             44679989999999999999999999729874315633