HHsearch alignment for GI: 254780279 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.32 E-value=0.024 Score=36.23 Aligned_cols=124 Identities=15% Similarity=0.219 Sum_probs=67.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHC--CCHHHHCCCCCCCCCC-CCCHHHHHCCCCEEEEEE-CCCH
Q ss_conf 99989987799999999838997899999648980204--5536660875467545-568578521355047631-0102
Q gi|254780279|r 8 ISVLGGGRMGQALIKEIHNNPSITLHSIIVRSGSPLIG--QDVGNFVGISPMGIKF-SDNLAMAIQSVDGIIDFS-SPAL 83 (280)
Q Consensus 8 V~I~GaGkMG~~ii~~i~~~~~~eLv~~i~~~~~~~~g--~d~~~~~~~~~~~v~i-~~dl~~~~~~~DViIDFT-~P~~ 83 (280)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~~~~~~~~-~~~daDvvVitaG~~rk 79 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYA-DAADADIVVITAGAPRK 79 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHH-HHCCCCEEEECCCCCCC
T ss_conf 98989688999999999867998879998189981156888877256346885398279889-96799999987898999
Q ss_pred -HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHH
Q ss_conf -478887643237215765022231358999874035552100001156899999999999
Q gi|254780279|r 84 -TLQSLNISAQHNIVHIIGTTGFSVKENEVISSFARNAPIVKSSNMSLGINFLGFLVETAA 143 (280)
Q Consensus 84 -~~~~~~~a~~~g~~vViGTTG~~~e~~~~l~~~s~~~~il~apN~SiGv~ll~~l~~~~a 143 (280)
T Consensus 80 pg~tR~dl-l~~Na~I~-------k~i~~~i~~~~p~~ivivvtNP---vDv~t~~~~k~s 129 (300)
T cd00300 80 PGETRLDL-INRNAPIL-------RSVITNLKKYGPDAIILVVSNP---VDILTYVAQKLS 129 (300)
T ss_pred CCCCHHHH-HHHHHHHH-------HHHHHHHHHCCCCCEEEECCCC---HHHHHHHHHHHH
T ss_conf 79988999-99888999-------9999999841997189985796---699999999961